| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1191 |
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| Symbol | nusB |
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| ID | 4922150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1383153 |
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| End bp | 1383557 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162725 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_001093320 |
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| Protein GI | 127512123 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000719059 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.900175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACCTT CAGAGCGCCG TAAAGCCCGT CGTCTAGCGG TACAAGCTAT CTATTCATGG
CAGCTAAGCG GCAATAATGT TGCCGACGTG GAGCATGAAT TTCTCACCGA GCAGAAGATC
GATGGCGTCG ACGTTAGCTA TTTCCGTGAA TTGCTATCAG GCACCACGAC CAAATCGGCT
CAGTTGGATG AGTTGATTAT GCCTCACCTC GAGCGCCCGT TCGATGAGGT TTCGCCTATC
GAGAAGGCGG TGCTGCGCAT CGCGACCTAC GAGCTGACCT TCCGTAAGGA TGTGCCTTAC
AAGGTAGCCA TCAACGAGGC TATCGAGCTG GCCAAGGCCT TCGGGGCCGA AGATGGTCAC
AAGTTCGTTA ACGGCATTCT CGACAAGATA GTCGCTAAAA AGTGA
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| Protein sequence | MKPSERRKAR RLAVQAIYSW QLSGNNVADV EHEFLTEQKI DGVDVSYFRE LLSGTTTKSA
QLDELIMPHL ERPFDEVSPI EKAVLRIATY ELTFRKDVPY KVAINEAIEL AKAFGAEDGH
KFVNGILDKI VAKK
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