| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1155 |
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| Symbol | |
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| ID | 4921482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1327929 |
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| End bp | 1328936 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162689 |
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| Product | threonine aldolase |
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| Protein accession | YP_001093284 |
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| Protein GI | 127512087 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2008] Threonine aldolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000619042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00631546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTGATT TTCGCAGTGA CACAGTAACT CAGCCCACGG CGGCGATGCG CCGCGCCATG
GCAGATGCCC AGGTTGGCGA CGATGTGTAT GGAGACGATC CCAGTGTTAA CCGACTGGAG
GCTATGGCGG CAGAGCGTTT TGGATTCGAC AGTGCCCTGT TTACCTCCTC GGGCACCCAG
GCCAACCTGC TGGCGCTGAT GTCTCACTGT GATCGTGGCG ATGAGTATCT CTGTGGTCAG
CAGGCCCACA ACTATAAGTT CGAAGGGGGC GGGGCGGCTG TGCTGGGCAG CATTCAACCT
CAGCCGCTCA CCAACCAGCC TGATGGCAGC ATCTTGCTGT CTGATATCGA GGCGGCCATC
AAACCGGACG ATTTCCATTT TGCCCGCACT CGTCTATTGA GTCTGGAAAA CACCATAGGC
GGCAAGGTGT TGCCTCAGTC CTATCTGGCC GAGGCGCAGG CGCTGGCCTT CAACAAGCGG
CTCAAGATTC ACTTAGATGG TGCCCGCATC GCCAATGCGG CGGTGGCTCA TAACCTGGAT
ATCGCCGATA TCACCCAGTA TTTCGACTCT GTCTCTATCT GTCTCTCTAA GGGACTGTGC
GCCCCCGTGG GCTCGCTGCT ACTCGGTGAT GAGCGGCTGA TCAACAAGGC CCGCCGCTGG
CGTAAGATGC TAGGTGGCGG CATGCGTCAG GCGGGGATTT TGGCGGTGGC CGGCGAGATT
GCCCTGAACG AGCAGGTCTC CCGCCTGGCA GTGGATCATG AAAACGCCCG CTATCTGGCC
GAGCAGTTAA GCTGTCTCGA TGAGTTCGAG GTAGATCTTG GCGAGGTGCA GACCAACATG
CTGTTTGCCC GGGTGGTAGA AGGTGTCGCC ATCGACAAGC TGGCCACGTC ACTGAAGGCA
TCTGGTATCC TCATCAGCCC GGGCAAGACG CTGCGGATGG TCACTCACGC CGATATCCGC
CTCGAAGATA TCGATCTCTT TATCGATAAG CTCAAGTCGC TGCTCTGA
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| Protein sequence | MIDFRSDTVT QPTAAMRRAM ADAQVGDDVY GDDPSVNRLE AMAAERFGFD SALFTSSGTQ
ANLLALMSHC DRGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQPDGS ILLSDIEAAI
KPDDFHFART RLLSLENTIG GKVLPQSYLA EAQALAFNKR LKIHLDGARI ANAAVAHNLD
IADITQYFDS VSICLSKGLC APVGSLLLGD ERLINKARRW RKMLGGGMRQ AGILAVAGEI
ALNEQVSRLA VDHENARYLA EQLSCLDEFE VDLGEVQTNM LFARVVEGVA IDKLATSLKA
SGILISPGKT LRMVTHADIR LEDIDLFIDK LKSLL
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