| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1132 |
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| Symbol | |
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| ID | 4921491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1308471 |
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| End bp | 1309142 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162667 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_001093262 |
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| Protein GI | 127512065 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00148629 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.544086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCTATC GTTTCCCCGC CAGCTTGGGT ATGATTGCGG CCATTGAAAC CTGCCACCAT
GAGTCAGCGA AAATGAATCA AATCGTATTA GCCAGCGGCA ACAAGGGAAA ACTGAAAGAG
TTTGCCGAGA TCCTTGCCGA ATTTGGCATA GAGGTTCTGC CACAGAGCCA ATTTAATGTT
CAAGAGGTCC CGGAAACCGG CACCACCTTC GTCGAGAACG CCATCATCAA GGCTCGCCAC
GCCGCCCAGG TAACCGGCCT TGCGGCCATC GCCGACGATT CCGGCCTGGA AGTAGACGCC
TTAGAGGGTG CCCCCGGCAT CTACTCGGCC CGCTACGGCG GCGAAGGCGC GAGCGATAGC
GACAACTACA CTAAGCTGCT CGGCGCCCTG AATGACAACG ACAAGCGCAG CGCGCGTTTT
CAGTGCATCC TGGTCTACAT GCGTCACGCC AAAGACCCGA CCCCAATCAT CTGCCAGGCC
TCCTGGGAGG GCAGCATAGG CTTCGAGCCT AAAGGCGATA ACGGTCATGG TTATGATCCA
GTCTTTATTC CGATGGATCA TGAGTGCAGC GCCGCCGAGC TGAGGAGCGA TGAGAAGAAT
GCCCTCAGCC ACAGAGGCAA GGCGATGCAA CTGCTGCTAA GCGAACTCAA GGCCAAGGGT
GTACTCGGCT AA
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| Protein sequence | MPYRFPASLG MIAAIETCHH ESAKMNQIVL ASGNKGKLKE FAEILAEFGI EVLPQSQFNV
QEVPETGTTF VENAIIKARH AAQVTGLAAI ADDSGLEVDA LEGAPGIYSA RYGGEGASDS
DNYTKLLGAL NDNDKRSARF QCILVYMRHA KDPTPIICQA SWEGSIGFEP KGDNGHGYDP
VFIPMDHECS AAELRSDEKN ALSHRGKAMQ LLLSELKAKG VLG
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