| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1130 |
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| Symbol | |
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| ID | 4924116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1305355 |
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| End bp | 1307196 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162665 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093260 |
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| Protein GI | 127512063 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0221143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATAA AAACAAAAAC AACTATGCTC GCCATCTCAC TGGCGACACT CCTTTCTGGC
GCAGTGCACG CCGCGCCAGT TTCACTCCCT CTACTTAGCG CCAGCGAACC GGTACAGAAG
ATCAGCGCCC AGGAATCGGA GAAGGCCAAT CAACTGTTCG AAACCATCTT CATGGAAAAT
GTGATGGCCA GCCCCATCAG CCAGACCCAT CTTGGGATCA AGACAGACTA TGGCAAGTGG
GATGAGCGAG GGGAAGCTGC CGACAAGAAG AGCCTTGCAA GAGATAAGCA GCATCTGGCC
CAGCTTAAGC AGATAGACAA AAGCAAGTTA GATGCCCAGA CCCTGCTTAG CTACGACCTG
CTGACTCAGA AACTCGAGCA GAGCATCAGC GACTACAAGT GGCGCCTGTA TACCTACCCG
GTAAACCAGA TGTACGGCGG CCACTCCATG GTGGCATCAT TCCTGATCAA CCAACATCAG
ATAGACAGCG TCTCGGACGC CGAGGCCTAT ATCAGCCGCC TCAAGGGTGT GCCCCACTAC
ATGCAGCAGT TGGAAGAAGC CCTAGAAGAG CGCGCCAAGG CGGGCATCAT AGCGCCTAAG
TTTGTGTTTG CCTATGTACT GTCAGACAGC CGCAACATCA TCAGCGGCGC CCCCTTCGAT
CAAACTGATG ACAGTGCCAT CTGGGCCGAT TTTCAGCGCA AGGTGGCTAA GCTAGCGATA
GACGATGCCC AGCGCAATAA GCTACTCGAT GAGGCCAAAC AGGCGCTGAC CGCTCAGGTT
AAGCCTGCCT ATGACAAGCT TATCGCCTAT GTCGAAACCC TGGAAAAGCG CGCCGATACC
AAAGATGGTG TATGGAAGTT TAGAGACGGC GAGGCCTTCT ACAACAACGC CCTGGCACGC
ACTACGACCA CCCACATGAC AGCCGATGAG ATCCACCAGC TGGGGCTCGC CGAGGTGGAC
CGCATCCATC AGGAGATGCG CGCCATCATG AAGAAGGTCG GCTTCGAGGG CGATCTTAAG
GCCTTCTTCA AGTTTATGCG TGAAGATAAG CAGTTCTACT ATCCCGACAC AGAGGAAGGC
CGCACCGCCT ATCTAGACGA TGCCAAGGCA TTGATAGATA ACATCTCCTC TCGTCTGGAC
GAGGTGTTTT TTGTTAAGCC TAAGGCGCCC ATGATAGTCA AACGGGTCGA GGCGTTCAGA
GAAAAATCGG CCGGTAAGGC CTTCTATAAT CAGCCCACAC CTGATGGCAG CCGCCCAGGC
ACCTACTACG CCAACCTGTA TGACATGGAG GCCATGCCCA AGTATCAGAT GGAAGCGCTG
GCCTACCACG AGGGTACTCC TGGCCATCAT ATGCAGATCG CCATCGCCCA GGAGCTGCAA
GGGATCCCTA AATTCAGAAA GTTTGGCGGC TACACCGCCT ACATAGAGGG CTGGGGGCTG
TACAGCGAGT TCTTCCCTAA GGAGATGGGC CTGTATAAAG ACCCCTACTC AGATTTTGGC
CGCCTAGCCA TGGAGCTATG GCGCTCATGC CGCTTGGTGG TGGATACCGG CATCCACGCC
AAGCGTTGGA CCCGCGAGCA AGGGATCCAA TACTATGTCA ACAACACCCC TAATGCCGAG
TCAGACGCCA TCAAGATGGT GGAGCGTCAT ATCGTGATGC CATCACAGGC AACCGCCTAC
AAGATAGGCA TGCTCAAGAT TGTCGATATT CGCGAGAAGG CCAAGGCGAT CATGGGCGAT
AAGTTCGATA TTCGCGAGTT CCACACTCTG GTACTCAAGA ACGGACCGCT GCCGCTGGAT
GTACTGGAAG CTAAGGTGAT GAACTGGGCT CATAAGGCCT AA
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| Protein sequence | MPIKTKTTML AISLATLLSG AVHAAPVSLP LLSASEPVQK ISAQESEKAN QLFETIFMEN
VMASPISQTH LGIKTDYGKW DERGEAADKK SLARDKQHLA QLKQIDKSKL DAQTLLSYDL
LTQKLEQSIS DYKWRLYTYP VNQMYGGHSM VASFLINQHQ IDSVSDAEAY ISRLKGVPHY
MQQLEEALEE RAKAGIIAPK FVFAYVLSDS RNIISGAPFD QTDDSAIWAD FQRKVAKLAI
DDAQRNKLLD EAKQALTAQV KPAYDKLIAY VETLEKRADT KDGVWKFRDG EAFYNNALAR
TTTTHMTADE IHQLGLAEVD RIHQEMRAIM KKVGFEGDLK AFFKFMREDK QFYYPDTEEG
RTAYLDDAKA LIDNISSRLD EVFFVKPKAP MIVKRVEAFR EKSAGKAFYN QPTPDGSRPG
TYYANLYDME AMPKYQMEAL AYHEGTPGHH MQIAIAQELQ GIPKFRKFGG YTAYIEGWGL
YSEFFPKEMG LYKDPYSDFG RLAMELWRSC RLVVDTGIHA KRWTREQGIQ YYVNNTPNAE
SDAIKMVERH IVMPSQATAY KIGMLKIVDI REKAKAIMGD KFDIREFHTL VLKNGPLPLD
VLEAKVMNWA HKA
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