| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1128 |
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| Symbol | |
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| ID | 4921869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1302855 |
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| End bp | 1303796 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162663 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001093258 |
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| Protein GI | 127512061 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAC TTTTAGAACC TATTGCAATT TTTACTCATG TTGCTCGCGC CGGGAGCTTT
AGCTCTGCCG CGCGAAAATT GGGGATTTCT AAATCAAAGG TCAGTACTCA GGTTGCCGAC
CTTGAGCATA AATTAGGTGT TCAGCTGATA CAGCGTACCA CTCGTAGCTT GAGTCTAACC
GAGGCCGGAC AGCTGCTTTA TGCCCAGGGT GAAGAGTTGC TTCGCGATGC CGATCAGGCG
GTCGCCAGCG TACACAATCT CAACGATGCC ACGCGCGGCG TACTCAAGGT GGGGATCTCC
CAATCCTTCG GTACCATGCA CATCATTCCT GCCTTACCAG ATTTCATGGC CAGACACCCT
GAGTTGGAGC TACAGGTTAG CCTGTTGGAT CATAAGGTTG ACGTGGTCAG TGAGGGCTTA
GATCTCCTGT TGACCATGTC TGAGCAGCTG CCGCTTGGCA TGGTGGCCAG GCCCCTGATG
AAGTGTCAGT TCCTGCTGGC AGCATCTCCC GAGTATGTGG CCAAGCACGG TTACCCTGAG
CGTCCAGAGC AGCTGGTGGA CCATAACTGC CTCGTGTATC ACGGCGAGTG GCATGAGCAC
AGCGTGTGGC AGTTTAAGAA GGGTGACGAT TATTGTGAGA TTGGCGTATC GGGTAACTTC
AGGGTCGACA ACGCGCCGGC GCTCAAGTCT GCAGCCGTGA GCGGTCTGGG TGTGGTGTAT
CTCGCCAGTT ACCTGCTTGA GAATGAGATA GAGAAGGGCA CCCTGGTTCC CTTATTGCCG
GAATGGCAGT TGACTCACCA TCTGCCATTG CAGGCCGTTT ACCCAAGACG TAAACACCTG
GCACCTAAGG TGAGCGCCTT TATCGACTTC ATTAAGGATC ATATCGGTTC ACCACCATAT
TGGGATGAGC CATACGCCGC CCTGTATGCC CAGCGTAAAT AG
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| Protein sequence | MLELLEPIAI FTHVARAGSF SSAARKLGIS KSKVSTQVAD LEHKLGVQLI QRTTRSLSLT
EAGQLLYAQG EELLRDADQA VASVHNLNDA TRGVLKVGIS QSFGTMHIIP ALPDFMARHP
ELELQVSLLD HKVDVVSEGL DLLLTMSEQL PLGMVARPLM KCQFLLAASP EYVAKHGYPE
RPEQLVDHNC LVYHGEWHEH SVWQFKKGDD YCEIGVSGNF RVDNAPALKS AAVSGLGVVY
LASYLLENEI EKGTLVPLLP EWQLTHHLPL QAVYPRRKHL APKVSAFIDF IKDHIGSPPY
WDEPYAALYA QRK
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