Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1120 |
Symbol | |
ID | 4923244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1296554 |
End bp | 1297108 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640162655 |
Product | cytochrome B561 |
Protein accession | YP_001093250 |
Protein GI | 127512053 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000137011 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTAAAA ATACCCAGAG CCGCTACGGC TTGGTGAGCA TAGGCCTGCA TTGGCTGACA GCGATTGCCG TATTAACGCT GTTCGCCCTG GGCGTGTGGA TGGTCGAGCT GACCTATTAC AGCGCCTGGT ATAAGCGAGC GCCGGATCTG CATAAGAGCA TAGGCGTGCT GCTGATGGTG TTAACCCTGT GCCGTCTGCT GTGGCGTTGG TTAAACCCGG CGCCTAAGTC GCTCCCCGGA CATCAAAGGT GGGAGAAGCT GGCTGCGGGC CTGGTGCATC GTCTGCTGTA TCTGATGCTG CTTGGCATCT TGATCTCTGG CTATCTTATC TCGACCGCCG ACGGCAGGGC CATTGGCGTT TTCTCACTCA TCGAGCTGCC AAGCCTGGGA CTATTGTTTG AGGGGCAGGC GGATATAGCC GGCAAAGTAC ACCAATATCT GGCCTATGGC TTTATCGCAT TGGTAACTCT GCATGGGCTT GGGGCACTTA AACACCACTT TATCGACAAA GACGCAAGCT TGAAACGCAT GTTAAACATT AAGGAGACAC AATGA
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Protein sequence | MFKNTQSRYG LVSIGLHWLT AIAVLTLFAL GVWMVELTYY SAWYKRAPDL HKSIGVLLMV LTLCRLLWRW LNPAPKSLPG HQRWEKLAAG LVHRLLYLML LGILISGYLI STADGRAIGV FSLIELPSLG LLFEGQADIA GKVHQYLAYG FIALVTLHGL GALKHHFIDK DASLKRMLNI KETQ
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