| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1116 |
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| Symbol | |
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| ID | 4921169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1290876 |
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| End bp | 1291775 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162649 |
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| Product | ATPase, BadF/BadG/BcrA/BcrD type |
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| Protein accession | YP_001093246 |
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| Protein GI | 127512049 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0080309 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTTA ACCAGACAGA GGAACAGGCC CTCGTCATAG GCATAGATGG TGGTGGCAGC
AAGTGCCGCG CGACTATCTA CGCCGCCGAT GACAGTGTGC TCGGCACTGG TGTGGCCGGG
CGTGCGAATC CGCTTTACGG CCTGACACAT ACCTTCGACT CTATCTCGCG CGCGACCGAA
CTCGCTCTAC AAGACGCCGG GCTAAAAGCT GGCGACGGCA AGACAATGGT GGCGGGCGTA
GGCCTGGCTG GAGTCAATGT CGCGCATCTC TATCAGGCGA TCAAAGCATG GCAGCATCCC
TTCGCAGAGA TGTATGTCAC CACAGATCTG CACACCGCCT GCATCGGCGC CCATAAAGGT
GGCGATGGCG CGGTGATCAT CACAGGTACC GGCTCCTGCG GCTATGCCCA CGTGGGCGAG
CAGTCCTTGA GCCTAGGCGG GCACGGCTTT GCCCTGGGCG ATAAGGGCAG CGGCGCCTGG
CTTGGCTTAC AGGCCGCGCA GCAGGTACTG TTAGATCTCG ATGGCTTCGG CCCGGCTACC
CAGTTAACCG AGCGTCTGTT GGAGCACTTC AAGGTGAACG ATGCCATGGG CATAGTCGAG
CACCTGGCGG GCAAATCATC CGGTTGTTAT GCCACCCTGG CGCGCACGGT GTTATCTTGT
GCACAGGCCC AGGATGAGGT GGCTAAGGCG ATAGTGGTCG AGGGCGCCGA GTATATCAGC
GCCTTGGCCC ACAAGTTATT TGAGATCCAC CCGCCGCGTT TCTCCATGAT AGGTGGCCTC
GCCGAGCCTC TGGCCCCTTG GCTGGATAAG CGGGTGGTCG ACAAGATCTC GCCAATTCTT
GCTCCGCCCG AATTAGGTGC CGCCTATTTT GCGCGTCAGC AGCTAGGCTT TAGCAGTTAA
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| Protein sequence | MGFNQTEEQA LVIGIDGGGS KCRATIYAAD DSVLGTGVAG RANPLYGLTH TFDSISRATE
LALQDAGLKA GDGKTMVAGV GLAGVNVAHL YQAIKAWQHP FAEMYVTTDL HTACIGAHKG
GDGAVIITGT GSCGYAHVGE QSLSLGGHGF ALGDKGSGAW LGLQAAQQVL LDLDGFGPAT
QLTERLLEHF KVNDAMGIVE HLAGKSSGCY ATLARTVLSC AQAQDEVAKA IVVEGAEYIS
ALAHKLFEIH PPRFSMIGGL AEPLAPWLDK RVVDKISPIL APPELGAAYF ARQQLGFSS
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