| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1079 |
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| Symbol | thrA |
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| ID | 4923784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1241698 |
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| End bp | 1244166 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162612 |
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| Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
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| Protein accession | YP_001093209 |
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| Protein GI | 127512012 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.555098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTAA TGAAGTTCGG TGGTACCTCG CTGGCCAATT GGCAGAGGTT TAATAGTGCG
GCGCAAATCG TCTTGGCTTC GGCCGCAGAG CAGCCGACGG CAGTGGTATT AAGCGCCCCG
GCAACCGTGA CCAACGGTTT GCTGGAGATG GTCGACCTGG CGGTGGCCGG AGATGATTTC
TTTCCAGTCT TGAGTCAGGT GCATGAGGTC TTTAAGACTC TCTATGGCCA AGCGGCCAGC
GAGGTGCTGA GCGGCGAGCA ATCCGATAGC CTAGAAGCTG TTCTGGCGGC GCAGCTAAAG
CACTGGCAAG ACAAGCTACA AGGCGTAGTC TTGCTGGGTG AGTGCCCCGA CGCTGTTCGC
GCCGAGATAG TGGTCGGTGG CGAGCGCCTC TCGGCGGCGT TGATGGAGCA GTTGATGTTG
GCGGCGGGCG TGTCGGCCAA TCAGCTAGTG CCACAGCAGC TGTTTGTGGC CCACGGGCCG
GCGCTCGAAT CGGTTGTCGA TATCGCTGCC AGTAAGCAGC GTTTTGCCGA GCTTTCTCTC
GATGCCCATC AGGTGTGGGT GATGCCCGGC TTTACCGCCG GCGATAAGGA TGGTCGTGTG
GTCACCCTGG GCCGTAACGG CTCAGACTAT TCGGCGGCCG TGCTGTCGGC CTGTATCGAT
GCCAGTTGCT GCGAGATCTG GACAGATGTT GATGGCGTCT ATAACACTGA CCCACGTGTC
GTCGCCGATG CTAAGCTTCT GACTCAGCTC AGTTATCAAG AGGCGATGGA GCTGTCTTAT
TTCGGCGCCA AGGTGCTACA TCCAAAGACA ATCGCCCCAA TCGCTCAGTA CCATATCCCT
TGCTATATAC GTAACAGCTT CAACCCTCAG GCGCCCGGCA CCTTAGTATC GAATCAGGTG
GACGAGACAG GTCTGAACGT TAAGGCTATC TCTAATCTCG ACGAGCAGAC CATGTTTGAT
ATCGCCGGTC CCGGCATGAA GGGCATGGTT GGCATGGCGA GTCGTACCTT GGGCGCCATC
TCCCGCTCTG GGGTATCAGT CTCTCTCATC ACTCAAAGCT CTTCGGAATA CAGCATCAGC
TTCTGCGTGG CGACCCAAGA TGCAGAGCGG GTGCGCGTGG CGCTGGAACA GGAGTTTGAG
CTGGAGCTTA AGAGCGAGAT CCTCGAGCAG ATCGCCATGC GCCACAATCT GGCCATCGTC
TCGCTGATCG GTGACGGCAT GCGCACTCAC AAGGGAGTTG CCGGTAAATT CTTCCAGGCC
TTGGCCCAGG CGAATGTCAA CATAGTGGCC ATCGCCCAGG GCTCCTCAGA GCGCTCCATC
TCGGCGGTTA TTGAGCTGCG TAAGACCAAG CATGCTATCG CCGCCTGCCA TCAGAGTTTA
TTCGATGTGC AGCACTATCT GGATGTATTC CTGGTGGGCT GCGGCAACGT GGGGGCCGGC
CTGCTCGAGC AGATCAAGCA GCAGACAGAG ATGTTGAAGG CTCAGCACAT TACGGTGCGC
GTCTGCGGCG TGGCCAACTC TCGCCACATG CTGCTCGATG CCAAGGGGAT AGATCTCAAC
CATTGGCAGG GACTGCTTGC CGACAGCCAG CAGGCCTGCG ACCTGGACAA GATGCTCGCC
TGGGCCAAAG ATCAGCAGCT ACTTAACCCT GTGCTGGTGG ATTGTACCTC TAACGAAGCC
GTGTCGGATC AATATGTTGC GGTAATGAAT GCCGGCCTGC ATGTGGTTAC TCCTAACAAG
AAGGCCAACA CCCGCGACTA TGACTATTAC CGCGCCCTGA GACAGACAGC TTTGCATCAG
CGTCGCCAGT TCCTCTACGA GACCACGGTT GGCGCCGGCC TGCCGGTTAT CGATAACCTG
AAGAAGCTGT TGTTCGCCGG TGATAAGCTG CAGAAATTCA ACGGCATCCT CTCGGGTTCA
CTCTCCTACA TCTTCGGCAT GCTCGATGAG GGGATGAGTC TGTCTGAGGC GACAGGTATC
GCCCGTGAGA AATGCTTTAC CGAGCCCGAC CCAAGAGACG ACCTGAGCGG CATGGACGTG
GCCCGAAAGG TGCTGATCCT TGCCCGCGAA GTCGGCATGC AGATAGAGCT GAGCGATATC
CAGGTGGAGT CTGTGTTGCC GAGTCATTTT GACGCCTCCG GCGATGTCGA GACCTTTATG
GCGAACCTGA GCGCACTTGA TGGCGAACTT GCCGAGCGCG TAAATAGCGC CAAGGCGGCG
GGTAAGGTGC TGCGTTATGT GGGACAGATA GACGAAGAGG GCTGCCGGGT GAAGATCGCC
GAGGTGGACG CCAAGGATCC CCTCTACAGC GTTAAGGGCG GTGAGAATGC GTTGGCCTTC
TATAGCCGTT ACTATCAGCC GATCCCATTT GTGCTGCGCG GCTATGGCGC GGGCACAGAG
GTGACGGCGG CGGGTGTGTT TGCCGACCTG CTGAGAACCC TTAACTGGAC ACGGGAGATG
GGCGTATGA
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| Protein sequence | MKVMKFGGTS LANWQRFNSA AQIVLASAAE QPTAVVLSAP ATVTNGLLEM VDLAVAGDDF
FPVLSQVHEV FKTLYGQAAS EVLSGEQSDS LEAVLAAQLK HWQDKLQGVV LLGECPDAVR
AEIVVGGERL SAALMEQLML AAGVSANQLV PQQLFVAHGP ALESVVDIAA SKQRFAELSL
DAHQVWVMPG FTAGDKDGRV VTLGRNGSDY SAAVLSACID ASCCEIWTDV DGVYNTDPRV
VADAKLLTQL SYQEAMELSY FGAKVLHPKT IAPIAQYHIP CYIRNSFNPQ APGTLVSNQV
DETGLNVKAI SNLDEQTMFD IAGPGMKGMV GMASRTLGAI SRSGVSVSLI TQSSSEYSIS
FCVATQDAER VRVALEQEFE LELKSEILEQ IAMRHNLAIV SLIGDGMRTH KGVAGKFFQA
LAQANVNIVA IAQGSSERSI SAVIELRKTK HAIAACHQSL FDVQHYLDVF LVGCGNVGAG
LLEQIKQQTE MLKAQHITVR VCGVANSRHM LLDAKGIDLN HWQGLLADSQ QACDLDKMLA
WAKDQQLLNP VLVDCTSNEA VSDQYVAVMN AGLHVVTPNK KANTRDYDYY RALRQTALHQ
RRQFLYETTV GAGLPVIDNL KKLLFAGDKL QKFNGILSGS LSYIFGMLDE GMSLSEATGI
AREKCFTEPD PRDDLSGMDV ARKVLILARE VGMQIELSDI QVESVLPSHF DASGDVETFM
ANLSALDGEL AERVNSAKAA GKVLRYVGQI DEEGCRVKIA EVDAKDPLYS VKGGENALAF
YSRYYQPIPF VLRGYGAGTE VTAAGVFADL LRTLNWTREM GV
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