Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1078 |
Symbol | |
ID | 4921043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1240366 |
End bp | 1240980 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640162611 |
Product | peptidylprolyl isomerase, FKBP-type |
Protein accession | YP_001093208 |
Protein GI | 127512011 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000031845 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.904135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAATCA CCCAACACAA AGCTGTTAGC ATCCATTACC GCTTAACGAA CCAGCAAGGC GAGTTGATCG AGAGTTCATT TGAAGGTGAG CCAATGCTAT ACCTTCACGG TGCAGAAAAC ATGATCCCAG GCCTTGAGCA GGCGCTCGAA GGCAAAAGTG TTGGCGACAA GCTCGACGTT ACCGTAGAAG CCGAACAGGC TTACGGTCCT TACCACGATG GTTTACGCCA AGATGTCCCA TTAGCAGCCT TCGGCGATAT CGAAGATATC GTGCCTGGCA TGCGTTTTAT CGCCGAAACA GAGATGGGCC AACGTCCGGT ACAAGTGACT GAAGTGAAAG ACGATGTGGT CGTGGTTGAC GGTAACCACC CACTCGCGGG TCAAACCCTT AACTTCAGCG TTGAAGTACT GTCAGTACGC GACGCTAGCG CCGAAGAGAT CGCCCATGGC CATATCCATG CGGCCGGCGG CTGTGGTAGC CACGAGCATA GCCATGAGGG TGGTTGCTGT GGCGGCGAAG GTCATGGTCA CCATGGCGGT TGCTGTAGCG AAGATCCTGA GAAGCCAGCC AAAGAAGGTT GTGACGGCAA CGGCGGTTGC GGCTGCCAGC ACTAA
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Protein sequence | MIITQHKAVS IHYRLTNQQG ELIESSFEGE PMLYLHGAEN MIPGLEQALE GKSVGDKLDV TVEAEQAYGP YHDGLRQDVP LAAFGDIEDI VPGMRFIAET EMGQRPVQVT EVKDDVVVVD GNHPLAGQTL NFSVEVLSVR DASAEEIAHG HIHAAGGCGS HEHSHEGGCC GGEGHGHHGG CCSEDPEKPA KEGCDGNGGC GCQH
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