Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1077 |
Symbol | |
ID | 4923749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1239804 |
End bp | 1240235 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640162610 |
Product | hypothetical protein |
Protein accession | YP_001093207 |
Protein GI | 127512010 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000135433 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCAAG ACCGAATCTG CTCGCTGCGT ATTAACGATA AGGATATCGA CATGATAGCT CAGCCCGTCT ATGAAAAACT CCCCGCCATC TACCTGCTCA TCGCAGCAAG TACCATATTG CTGAGCCCGG CGCCCCTTCC TGTGCTCTTA GCCGTGATCA TCTTCCTTCT CGGCGCGCGT ATCTTCAATA TGCGTTCGCA AAACCGGCGG AGCGACAATC CCAAGCGTCG CAGGCGCGGA CTCTTGCCTG AAGCCCTCTA TAATCTATTG CCCTATAAAT ACCTACTAGG CGCCCTGTTT GTCTTTCGCC ATGGCGACTC GAATTATCTG ATGTTTGCCG GCGCAGGATT AACCTGTTTC GCACTGTTTC GTCTGGCGCA GCGCCGCAGC TATCGTCAGC ACCAACTACC CGTGACAATT CGGGTGATCT AG
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Protein sequence | MLQDRICSLR INDKDIDMIA QPVYEKLPAI YLLIAASTIL LSPAPLPVLL AVIIFLLGAR IFNMRSQNRR SDNPKRRRRG LLPEALYNLL PYKYLLGALF VFRHGDSNYL MFAGAGLTCF ALFRLAQRRS YRQHQLPVTI RVI
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