Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1075 |
Symbol | |
ID | 4920971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1238761 |
End bp | 1239222 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640162608 |
Product | cytochrome c, class II |
Protein accession | YP_001093205 |
Protein GI | 127512008 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000870281 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC AGATTAAATT AAGCCTGCTA GCCCTAGCCG GCAGTGCCTT ACTGGCCTCA GCGGTACAAG CCAATAACTT CAAAGAGACA GACGATGCGA TCCACTATCG TCAATCTGCT TTTGGCCTGA TCGCTCACAA CTTTGGCGAC ATGGGCGCCA TGCTTAAGGG CAAGAAGCCG TTCGACGCCG AAGTCTTTGC CATGCGTGCA CAAAACGTTG CCGCACTGAG CAAGCTACCT GCCGAAGGAT TCGTTGCCGG TTCTGACAAG GGCCACACAG ATGCGCTGGC AAAGATCTGG AGCGACAAGG CCGATTTCGA CGCTAAGATG AGCGCTTTCC AAGACAACGC CGCTAAACTC GCCGTTGCCG CACAATCAAG CGATCAGAAC GCTATCAAGC AAGCCTTTAT GAACACAGGC AAGAGCTGTA AGGGCTGCCA CGACGTCTAC AAGAAAGACT AA
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Protein sequence | MKKQIKLSLL ALAGSALLAS AVQANNFKET DDAIHYRQSA FGLIAHNFGD MGAMLKGKKP FDAEVFAMRA QNVAALSKLP AEGFVAGSDK GHTDALAKIW SDKADFDAKM SAFQDNAAKL AVAAQSSDQN AIKQAFMNTG KSCKGCHDVY KKD
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