| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1070 |
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| Symbol | |
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| ID | 4923446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1232541 |
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| End bp | 1233626 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162603 |
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| Product | oxidoreductase FAD-binding subunit |
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| Protein accession | YP_001093200 |
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| Protein GI | 127512003 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC AAGATTATCT ATCACCCAAC TGGCAAGCCG GCGAGACTAG ACTCGTCTGT
GTCGAGCGCT GGCAGGAAAC CCATGATGTG ACCAGCTTTC GCTTTCAAGG GGCGCAGCCG
GTTAAGTTTC ATTTTAAGCC GGGACAGTTC ATCACTTTCC TGCTGGATAT TGAGGGGGAG
CGAGTTGCCC GCAGCTATAC CATCTCGTCG TCACCCTCGC GTCCATACTC CCTGGTGGTG
ACCGTCAAGC GTATTCCTGG CGGGCGGGTG TCCAATTACC TGGTCGATAA CCTCAAGGTG
GGGCACAGCG TCAACGTCAG CGGTCCGGCT GGCGCCTTTA ATCTGATCGA CATTCCCGCC
AATCGTTACC TTTTCTTAAG TGCCGGCAGT GGTATTACCC CCATGTATTC CATGTCGCGC
TGGTTGACGG ACACTCAGCT GGGCAGCGAT ATCGCCTTCG TGCACAGCGC CAAGGCCAAG
GAAGATCTCA TTTTTCATGA GGCGCTGCTT AAGATGGCCC AGCGTCATCC CAATATGGCG
CTGCTCTACA GCTTGGAGTC TGGCGAGTCG CTCGAGGCCC GTGCTAGTTG TGAGGGCTTT
TCTTGCTTCG ACGGGAGATT TAACCTGGAG ATGCTCGTGA AGGCCGTGCC TGATTATCTT
GATCGCACAG TGTTCGTCTG TGGCCCCGAG CCCTACATGC AGGCGGTGAA GGCAATGTTG
CAAGATGCTG GGTTCGACAT GAGTCGTTAT CATCAGGAGA GCTTCGGCGC GCCTGCCTCA
TCGTCTGCAT CGCAAGTCGA AGACCTGGAC GAGATTGCGG GTTCTACTCC CTTTATGCTG
CAGATCGGTG ATCTGTCTAC GCCCCTCACT GGAGAGCAGA CGGTACTGGA GGGGATAGAG
GCGAAAGGAT TGCCCATTAT CGCCGCCTGT CGCTCAGGGG TCTGCGGCGC CTGTAAGTGT
CAGGTGCTAA GCGGCGAGAC AGAGTCCAGC AGCGAGATGA CGCTTACACC GGCCGAGGTA
GCGCAGGGCT TCATTCTCGC CTGCTCGACG CGATTAAAGT CTGATGTAAC CCTCTCCTTG
GCATAA
|
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| Protein sequence | MNQQDYLSPN WQAGETRLVC VERWQETHDV TSFRFQGAQP VKFHFKPGQF ITFLLDIEGE
RVARSYTISS SPSRPYSLVV TVKRIPGGRV SNYLVDNLKV GHSVNVSGPA GAFNLIDIPA
NRYLFLSAGS GITPMYSMSR WLTDTQLGSD IAFVHSAKAK EDLIFHEALL KMAQRHPNMA
LLYSLESGES LEARASCEGF SCFDGRFNLE MLVKAVPDYL DRTVFVCGPE PYMQAVKAML
QDAGFDMSRY HQESFGAPAS SSASQVEDLD EIAGSTPFML QIGDLSTPLT GEQTVLEGIE
AKGLPIIAAC RSGVCGACKC QVLSGETESS SEMTLTPAEV AQGFILACST RLKSDVTLSL
A
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