| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1068 |
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| Symbol | tyrA |
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| ID | 4924379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1229125 |
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| End bp | 1230279 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162601 |
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| Product | bifunctional chorismate mutase/prephenate dehydrogenase |
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| Protein accession | YP_001093198 |
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| Protein GI | 127512001 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01799] chorismate mutase domain of T-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0518794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACACG CGCAAATGAG TGAGAAAACC ACTAACGAAC TGGAAAAACT GAGAGAGCAT
ATCGACAGCG TCGATCAACA GCTGCTACAT CTGCTGCGTA AACGCCTGGA TCTCGTGGCC
CAGGTGGGCG GCGTCAAGCA TGCGGCCGGC GTGCCCATCT ACGCGCCTCA ACGTGAGGCC
TCCATGCTGG CCAAGCGCCG GGAAGAGGCG GCAAAGATGA ATGTCTCGCC CCAGCTGATC
GAAGATATTC TGCGCCGCCT GATGCGCGAG TCCTATCTCA ACGAGAAGGA CGTCGGTTTC
AAGCAGGTAA AGACGGATCT GGGCCATGTG GTGATCGTCG GTGGTCAGGG CAAGCTAGGC
GGCCTGTTTG CGCAGATGCT GAGCCTGTCC GGCTATCAGG TGAAATCTCT TGATAAAGAC
GACTGGCAGC AGGCCGACGC GATTTTCGAT GGGGCTGGGA TGGTGATAGT CACTGTACCC
ATTAGCATCA CCTGTGAGCT TATTCGCGAC AAGCTTACCA GCCTGCCAAG CAGCTGTATC
CTGGCCGATC TGACGTCGAT CAAGGAGAAG CCGCTTGAAG CGATGCTAGC CAGCCATCAA
GGCCCGGTAG TAGGTCTGCA TCCCATGTTC GGTCCAGATG TGGGCAGCCT GGCCAAACAG
GTGGTGGTGG TGTGTCATGG CCGCGGCCGC GAGCAGTACG AATGGCTGCT GGAACAGATA
GGGATCTGGG GCGCTCGCCT AGTCGAGGCC GATGCTCAGC AGCACGATAA GGCGATGCAG
CTGGTGCAGG CGATGCGTCA CTTCTCCTCC TTCGTCTATG GCCTGAATCT CTATCGTGAG
GCGGCGGATA TCGACAACCT GTTGCAGTTC AGCTCGCCTA TCTACCGACT GGAGCTGGCG
ATGGTCGGGC GCCTGTTTGC CCAGAGTCCC GAACTCTATG CCGATATCAT CTTCGCCCAG
CAGGAGAGCC TGACCGCAAT AGGGGATTAC CTGGATAACT ATGCCCAGGC GCTCGAACTC
CTGAAGCGCG GCGACAGGCA AGGTTTCATT CGCGAATTCG AGGAAGTGGC GGCCTGGTTT
GGGGATTTTG CGCCTCAGTT CCAACGCGAG AGCCGGGCGA TGTTGCAGTC GGTTAATGAT
ATGAAGACAG GCTAA
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| Protein sequence | MEHAQMSEKT TNELEKLREH IDSVDQQLLH LLRKRLDLVA QVGGVKHAAG VPIYAPQREA
SMLAKRREEA AKMNVSPQLI EDILRRLMRE SYLNEKDVGF KQVKTDLGHV VIVGGQGKLG
GLFAQMLSLS GYQVKSLDKD DWQQADAIFD GAGMVIVTVP ISITCELIRD KLTSLPSSCI
LADLTSIKEK PLEAMLASHQ GPVVGLHPMF GPDVGSLAKQ VVVVCHGRGR EQYEWLLEQI
GIWGARLVEA DAQQHDKAMQ LVQAMRHFSS FVYGLNLYRE AADIDNLLQF SSPIYRLELA
MVGRLFAQSP ELYADIIFAQ QESLTAIGDY LDNYAQALEL LKRGDRQGFI REFEEVAAWF
GDFAPQFQRE SRAMLQSVND MKTG
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