Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1058 |
Symbol | acpS |
ID | 4921532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1220313 |
End bp | 1220714 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640162591 |
Product | 4'-phosphopantetheinyl transferase |
Protein accession | YP_001093188 |
Protein GI | 127511991 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) |
TIGRFAM ID | [TIGR00516] holo-[acyl-carrier-protein] synthase [TIGR00556] phosphopantethiene--protein transferase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTTG GTTTAGGGAC AGATATCGTC GAGATCGCGC GTATCGCCGA CAAGGTGCCC GCGGCGGGAG ACGAGGCGGC GCTGGCCAAG TGTCCGCTCG CCAAGCGTGT GTTGACCCAG GCCGAGATGG CAATATTTGT CGCTTCCTCC CAACCCGGTC GCTATTTGGC GAAGCGTTTT GCCGCCAAAG AGGCGGCCGC CAAGGCACTG GGCACCGGCA TTGGACGCGG TGTCTCCTTC CAGCATATCG AGATCAGTAA CGATGCTAAC GGTGCGCCGC TCATCGCCTT TCAAGGTGGT GCGGCCGAGC GGCTGAGTCT GTTGGGCGGC AGCCGTGCCC ATCTCTCCAT CGCCGATGAG AAACACTATG CCACGGCGAC CGTGATCCTC GAGTCAAACT AG
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Protein sequence | MIVGLGTDIV EIARIADKVP AAGDEAALAK CPLAKRVLTQ AEMAIFVASS QPGRYLAKRF AAKEAAAKAL GTGIGRGVSF QHIEISNDAN GAPLIAFQGG AAERLSLLGG SRAHLSIADE KHYATATVIL ESN
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