Gene Shew_1058 details

Gene Information

• Locus tag: Shew_1058
• Symbol: acpS
• ID: 4921532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella loihica PV-4
• Kingdom: Bacteria
• Replicon accession: NC_009092
• Strand: +
• Start bp: 1220313
• End bp: 1220714
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640162591
• Product: 4'-phosphopantetheinyl transferase
• Protein accession: YP_001093188
• Protein GI: 127511991
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase)
• TIGRFAM ID: [TIGR00516] holo-[acyl-carrier-protein] synthase; [TIGR00556] phosphopantethiene--protein transferase domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTGTTG GTTTAGGGAC AGATATCGTC GAGATCGCGC GTATCGCCGA CAAGGTGCCC 
GCGGCGGGAG ACGAGGCGGC GCTGGCCAAG TGTCCGCTCG CCAAGCGTGT GTTGACCCAG 
GCCGAGATGG CAATATTTGT CGCTTCCTCC CAACCCGGTC GCTATTTGGC GAAGCGTTTT 
GCCGCCAAAG AGGCGGCCGC CAAGGCACTG GGCACCGGCA TTGGACGCGG TGTCTCCTTC 
CAGCATATCG AGATCAGTAA CGATGCTAAC GGTGCGCCGC TCATCGCCTT TCAAGGTGGT 
GCGGCCGAGC GGCTGAGTCT GTTGGGCGGC AGCCGTGCCC ATCTCTCCAT CGCCGATGAG 
AAACACTATG CCACGGCGAC CGTGATCCTC GAGTCAAACT AG 

 

Protein sequence

MIVGLGTDIV EIARIADKVP AAGDEAALAK CPLAKRVLTQ AEMAIFVASS QPGRYLAKRF 
AAKEAAAKAL GTGIGRGVSF QHIEISNDAN GAPLIAFQGG AAERLSLLGG SRAHLSIADE 
KHYATATVIL ESN