| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1057 |
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| Symbol | |
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| ID | 4921109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1219531 |
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| End bp | 1220268 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162590 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | YP_001093187 |
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| Protein GI | 127511990 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTA TTCATCTAGG CGTTAATATC GATCACATTG CCACCTTACG TCAGGCCCGT
GGGACCAGTT ACCCGGATCC CGTCCATGCC GCAGCCGTTG CTGAGCATGC CGGCGCCGAA
GGTATTACCG TGCATCTGCG TGAAGACAGA CGCCATATCT GCGACAGAGA CATCTATCTG
CTGGCCAAGA CCATCAAGAC ACGCATGAAT TTCGAGATGG CGGTGACCGA CGAGATGTTG
GATATCGCCT GCGAGGTGAA GCCTGCCTAT GTCTGTTTGG TACCTGAGAA GCGTGAAGAG
CTGACCACAG AAGGCGGCCT GGATGTGGCG GGCCAGCAGG ATAAGATCCG CGCCGCGGTC
GAGCGTTTGA CTGCCCTGGG CATCAAGGTG TCGCTGTTTA TTGATGCCGA CCCTGTGCAG
ATCGATGCCA CTGTCGCCGT AGGTGCCCCG GTTATTGAGC TACACACAGG TTGCTATGCC
GACGCCGAGA CAGATGCCGA ACAGGCCAAG GAGCTGGCAC GCATTACCGA GATGGCAACC
TACGCCCACG GTAAGGGGCT GGTGGTCAAC GCGGGCCATG GTCTTCATTA TCACAATGTG
AAGTCTATCG CGGCCATTCC TGAGCTTTAT GAGCTTAATA TCGGTCATGC CATCATCGCC
CGCGCAGCTA TCGATGGCTT AGATAAGGCG GTACGTGACA TGAAGCAGCT GATGGTCGAA
GGTCGCAGCG GTCAGTAA
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| Protein sequence | MSRIHLGVNI DHIATLRQAR GTSYPDPVHA AAVAEHAGAE GITVHLREDR RHICDRDIYL
LAKTIKTRMN FEMAVTDEML DIACEVKPAY VCLVPEKREE LTTEGGLDVA GQQDKIRAAV
ERLTALGIKV SLFIDADPVQ IDATVAVGAP VIELHTGCYA DAETDAEQAK ELARITEMAT
YAHGKGLVVN AGHGLHYHNV KSIAAIPELY ELNIGHAIIA RAAIDGLDKA VRDMKQLMVE
GRSGQ
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