| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1053 |
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| Symbol | |
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| ID | 4923026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1216015 |
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| End bp | 1216932 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162586 |
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| Product | signal peptidase I |
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| Protein accession | YP_001093183 |
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| Protein GI | 127511986 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0413438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCTT ATTTTTCCCT TATCCTGGTC TTGGTGACCC TAGGCAGCGG CCTGATCTGG
ATGTTCGATG CCTTAGTCTT AGCCCCCAAG CGTCAGCAGA AGCTGGCCAT GGCGCAGGCG
GCCAACCAGG AGATTAGCGA AGAGAGCGCC GAAAAAATCG TGCGTGAGTC CGCCATAGTG
GAGACCTCGC GTTCTATTTT TCCGGTTATC GCTTTCGTGT TGATCCTACG CTCTTTTATT
TATGAGCCTT TCCAAATTCC TTCGGGATCT ATGATGCCAA CCCTGCTGGT GGGCGATTTC
ATCCTGGTGG AAAAATTTAG CTATGGGCTG AAAGATCCTG TGTGGCGTAG CAAGCTTATC
GAGACGGGCA AGCCACAGCG CGGTGACGTG GCGGTATTTA AATACCCAGA AAACCCACAG
ATCGACTACA TCAAGCGTGT CATCGGCCTG CCGGGGGATC GCATCGTCTA TCGTAACAAG
GACCTCTATA TTCAGAAAGC CTGCCCAGAG GGGCAGAGCG AGTGTCCTAA GCTAGAGAAG
ATAGAGCGTG CCGGCGTCAA CCAGGGCGAA TATACCCAGG ATAATATCCC GCTGCTGCGC
TACAAGGAGC AACTGGGCGA TGTGACCCAC GATATCCTGA TCAACCCAGG ACGCGGCGAG
CCGACCTCTT ACTATTTCCG CGAGGGTAAC CTGGCGGTGG GCGAGTTTGT TGTGCCTGAA
GGTCAGTATT TCATGATGGG TGACAACCGC GACAACAGCA CAGACTCACG CTTCTGGGGC
TTCGTGCCCG AGGCCAATCT GGTCGGCAAG GCGGTAGCGA TCTGGATTAG TTTTGAATTT
GAGCGTAAGC CGTCGGACTT TTTACCGACT TGGGTACCGA CAGGCGTACG CTTTAACCGT
GTAGGCGGAA TTGTGTAG
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| Protein sequence | MAAYFSLILV LVTLGSGLIW MFDALVLAPK RQQKLAMAQA ANQEISEESA EKIVRESAIV
ETSRSIFPVI AFVLILRSFI YEPFQIPSGS MMPTLLVGDF ILVEKFSYGL KDPVWRSKLI
ETGKPQRGDV AVFKYPENPQ IDYIKRVIGL PGDRIVYRNK DLYIQKACPE GQSECPKLEK
IERAGVNQGE YTQDNIPLLR YKEQLGDVTH DILINPGRGE PTSYYFREGN LAVGEFVVPE
GQYFMMGDNR DNSTDSRFWG FVPEANLVGK AVAIWISFEF ERKPSDFLPT WVPTGVRFNR
VGGIV
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