| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1033 |
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| Symbol | |
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| ID | 4920696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1195790 |
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| End bp | 1196782 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162566 |
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| Product | putative radical SAM protein |
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| Protein accession | YP_001093163 |
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| Protein GI | 127511966 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1242] Predicted Fe-S oxidoreductase |
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| TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.247016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCAT CAAGCCAGTT ACAATCGCCG CCCTTTTATC GATCGAGAGA ATACCCCGTG
GGACTGGATA GCCATGTCAA CACCTTTGGC CTGCATTGCA AGCGTCAGTA TGGTCAGCGC
CTCAAGAAGC TGACCTTGGA TGCCAAGTTT ACCTGCCCCA ATCGTGACGG CACCCTGGGA
CGGGGTGGCT GTACCTTCTG TAATGTGGCC TCCTTCAGCC ATGAGCATGG CTCGATAGAC
AGTATCGCCG TGCAGCTGGC CAATGGTCGC GAGCGCGCCC AGGGCAAATC CAGCAAGTTC
ATCGCCTACT TTCAGGCCTA CACGAGCACC TATGACGAGT ATCAGTTGCT CAAGCAGCGC
TATGATGAGG CGGTGGCCGA CAGCGATATC GTAGGCCTGT GTGTCGGCAC CCGTCCCGAT
TGTGTCAGCG ACGAGGTGAT CGCCCTGCTG GCCGGTTATC AGGCCCGTGG CCTGGAGGTG
TGGCTGGAGC TCGGCTTGCA AAGCGCCAAC CTTGAGACGC TTAAGCGGAT CAATCGTGGA
CATGGTTTTG AGGAGTATCG TGATACTGTC ATCCGGGCGA GAAAGGCGGG ATTAAAGGTG
TGTACCCACC TGATCTTAGG GCTGCCAGGT GAGAGCCATG AGGACTTTTT AGCCAGTCAC
AGGGCGGTGC TGGATGCTGG GGTCGATGGG CTCAAAATTC ATCCACTGCA TATCGTCGAG
GGCAGCACCA TGGCCAAGGC CTGGCGGGCC GGGCGCATGA GTTTATTGAC CCAGGAAGCC
TACGCAGAGA GCGTCGGCGA GCTGATTCGT CTCACGCCTA AAGAGGTGAT TTTTCATCGT
GTTACCGCCT ATGCCAAGAA ACCTATGCTG CTGGCACCCG ACTGGTGTGC CTATCGCTGG
GAGGGGTTGG TGGCCATCGT CAAGAACCTG GAACGCCTGG GCGGACAGGG GCATTATTTG
ACCGATTCGG CAGGTGATCA ATTGTCGGTT TAG
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| Protein sequence | MAPSSQLQSP PFYRSREYPV GLDSHVNTFG LHCKRQYGQR LKKLTLDAKF TCPNRDGTLG
RGGCTFCNVA SFSHEHGSID SIAVQLANGR ERAQGKSSKF IAYFQAYTST YDEYQLLKQR
YDEAVADSDI VGLCVGTRPD CVSDEVIALL AGYQARGLEV WLELGLQSAN LETLKRINRG
HGFEEYRDTV IRARKAGLKV CTHLILGLPG ESHEDFLASH RAVLDAGVDG LKIHPLHIVE
GSTMAKAWRA GRMSLLTQEA YAESVGELIR LTPKEVIFHR VTAYAKKPML LAPDWCAYRW
EGLVAIVKNL ERLGGQGHYL TDSAGDQLSV
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