Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1028 |
Symbol | |
ID | 4920862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1186752 |
End bp | 1187357 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640162561 |
Product | hypothetical protein |
Protein accession | YP_001093158 |
Protein GI | 127511961 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.354619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.859767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATG TATTAATTCT TTATCCAAAG CTATTTAATT GCTACTCGAA GTTCTCGAGA AAAGTTTTGA AAATAACCTC GAGTCTTGGC GCAGCTACAT TGGTGTATCC AGATGATCCA AATGGTTTAA TTGAAAAGTT CTGTGAAGAA AGCTCAGGAA AAATGACAAA TAAAGAATTT CCTAACTGGA CTCCTGACGA CATAACTCAT GCCATTATTT TCGACGATGG TGAAGAGTTT ATAGAAGAAA CAGAGCGATT AAAAGAAAGT AAAAAACCAT TAAGGTTAAT TGGAATTTGC ATAACACGAG TTATAAATAT CAAGACTGAG ACGGAATACC AATCAGAGAA AAGCACTCCA ATTTATGAGT ATATCGGAAG GGGTTCTTAT TGGGGAAACC CTTACTCTAT GTTTGAGGAG GGGGAAGATC GTGAAGAAGT TATAAGAAAG TACAAATACG ACTTTGATTT TGAGAAATTC CCAAATAAGG AAAAGTCTGA AGTGTACAAG TTAGCAGGAA AGCGCTTGGG CTGCTTTTGC AAGCCGCAAG CCTGTCACGG TGATGTCCTT GCAGACTTTC TTAATTCGTG GGATGACGGC AAGTAA
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Protein sequence | MNNVLILYPK LFNCYSKFSR KVLKITSSLG AATLVYPDDP NGLIEKFCEE SSGKMTNKEF PNWTPDDITH AIIFDDGEEF IEETERLKES KKPLRLIGIC ITRVINIKTE TEYQSEKSTP IYEYIGRGSY WGNPYSMFEE GEDREEVIRK YKYDFDFEKF PNKEKSEVYK LAGKRLGCFC KPQACHGDVL ADFLNSWDDG K
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