| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1022 |
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| Symbol | |
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| ID | 4924137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1181413 |
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| End bp | 1182609 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162555 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_001093152 |
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| Protein GI | 127511955 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0241609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATT TAGACCAAGC ATTAGCAGAA ATTAAACGTG GTACCGACGA GATCTTGCTC
GAATCGGATC TGCTGGAAAA ATTAAAAGAG GGACGTCCTC TGCGCATCAA GTTGGGTGCC
GACCCAACCG CGCCGGATAT TCATCTTGGC CATACTGTGA TCCTCAATAA GATGCGTGCC
TTCCAGGAGC TGGGACACGA AGTGATCTTC CTGATCGGCG ACTTCACCGG CATGGTGGGT
GACCCGAGTG GTAAGAACAG CACGCGTCCG CCGCTGACCC GCGAGCAGGT GTTGGCGAAC
GCCGAAACCT ACAAGGAACA GGTGTACAAG ATCCTGGACC CGGCCAAGAC CCGCATCGAG
TTCAACTCGA GCTGGCTAGA GGAGCTGGGC GCGGCGGGCA TGATCCGCTT GGCCTCACAG
CAGACCGTTG CGCGTATGAT GGAACGTGAC GACTTTAAGA AGCGCTATGC CTCGGGTCAG
TCGATCGCCA TCCACGAATT TATGTACCCA CTGCTGCAGG GCTATGACTC TGTTGCGCTG
GAAGCCGACG TCGAGCTTGG CGGTACGGAT CAGAAGTTCA ACCTGCTGAT GGGCCGTGAA
CTGCAAAAAG CCGCGGGTCA GAAGCCACAG GCGGTGATCA TGATGCCGCT GCTGGAAGGT
CTGGACGGCG TGAAGAAGAT GTCTAAGTCA GCCAACAACT ATATCGGCGT CAGCGAGCCT
GCCGGTGAGA TGTTTGGCAA GATCATGTCT ATCTCAGATG ACCTGATGTG GCGCTACTTC
GAGCTGCTCT CTTTCCGTCC ACTGGAAGAG ATTGCCCAGC TTAAGAGCGA CGTCGACAAC
GGCACCAACC CAAGAGATGT GAAGATCGCC CTGGCGAAAG AGATCATCGC CCGTTTCCAC
GACGAGGCAG CAGCCGAGGC GGCGCATCAG GAGTTTATCA ACCGCTTCCA GAAGGGCGCG
ATCCCAGATG ATATCCAGGA GATCGAGATT GCCGCCGGTG ACGGTATCGG CATCGCCAAC
GTGCTTAAAG ATGCTGGCCT GGTCAGCTCG ACCTCTGAGG CGATGCGTAT GATCAAGCAG
GGCGCGGCTA AGCTGGATGG CGACAAGATT GAAGACAGCC GTCTAGTGCT TAACGCCGGC
ATGACGGGCG TGTTCCAGGT GGGTAAGCGC AAGTTTGCCA AGATCACCCT GGTGTAA
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| Protein sequence | MANLDQALAE IKRGTDEILL ESDLLEKLKE GRPLRIKLGA DPTAPDIHLG HTVILNKMRA
FQELGHEVIF LIGDFTGMVG DPSGKNSTRP PLTREQVLAN AETYKEQVYK ILDPAKTRIE
FNSSWLEELG AAGMIRLASQ QTVARMMERD DFKKRYASGQ SIAIHEFMYP LLQGYDSVAL
EADVELGGTD QKFNLLMGRE LQKAAGQKPQ AVIMMPLLEG LDGVKKMSKS ANNYIGVSEP
AGEMFGKIMS ISDDLMWRYF ELLSFRPLEE IAQLKSDVDN GTNPRDVKIA LAKEIIARFH
DEAAAEAAHQ EFINRFQKGA IPDDIQEIEI AAGDGIGIAN VLKDAGLVSS TSEAMRMIKQ
GAAKLDGDKI EDSRLVLNAG MTGVFQVGKR KFAKITLV
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