| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1020 |
|---|
| Symbol | anmK |
|---|
| ID | 4923588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 1178664 |
|---|
| End bp | 1179773 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640162553 |
|---|
| Product | anhydro-N-acetylmuramic acid kinase |
|---|
| Protein accession | YP_001093150 |
|---|
| Protein GI | 127511953 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.01577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC ATTACTATAT CGGCCTGATG TCGGGCACTA GCATGGATGG TGTCGACGCG
GTATTGGTCG ACTTCAGCGA CGATAAGATC ACCCTGGTCG ATACCCATAC CGAGCCGCTG
CCCAGCCATC TGCTGAGCGG CCTGCAGCGC CTGTGTCAGT CGGGATCGGA CGAGATCAAC
CGCATGGGCA TACTGGACCG CAGCGTCGGC AAGCTGTTTG CCCAGGCGGT GGAGGGCCTG
CTGACCAAGA GCGGCGTCGA CAGACATCAG ATCATGGCCA TCGGCAGCCA CGGCCAGACG
GTGCGCCACA TGCCCAACCT GGAGCTGGGT TTTACCCTGC AGATTGGCGA CCCCAACACC
ATAGCCGCCC TCACGGGCAT AGATGTTATC GCCGACTTTC GCCGCAAAGA TATCGCCCTG
GGTGGTCAGG GCGCGCCTCT GGTACCCGCC TTTCACCAAC AGCTATTTGC GAGAACCGGG
CACCAGCGGA TGATCCTCAA CATAGGCGGC ATCTCCAACA TCACCTATCT GCCTGGGGAT
GCCAGCGCTG TAATTGGTTT CGATAACGGT CCGGGCAATA CCCTGATAGA CACTTGGATC
AAGCAGGTTC AAGGTGAGGC TTACGATAAG GACGGCGCCT GGGCGGCCAG CGGCAAGACG
GATGAGCAGC TACTCAAGCA GATGCTTTCC CACTCCTATT TCTCCCTCAG CGCCCCCAAG
AGCACGGGAC GCGAGCTGTT TAACCAGGCC TGGCTGGAGC AGCAGACCTC CGATTTCGGC
TATCTGCACG AGTCGGATAT TCAGTCCACC CTGCTGGATC TCACCTGCCA CAGCATAGCC
AACGACTGCC TCAAGCTCAC CGAAAAGGCC GAGCTCTATG TGTGCGGTGG CGGCGCCTTT
AACACTGAGT TGCTAACACG TCTGGCGGCG CTGCTGCCAG GCTATCAGGT GCATACCACC
GCCAGCCTGG GGGTCGATCC TCAGTGGGTG GAAGGCATCG CCTTCGCCTG GCTCGCCATG
CGCCACAAGC TGGGGCTACC GGGTAACCTG CCGGCCGTCA CGGGCGCCAG CCGGGAAACC
GTGCTCGGCG GCCTCTTCCC CGGCAACTGA
|
|---|
| Protein sequence | MSKHYYIGLM SGTSMDGVDA VLVDFSDDKI TLVDTHTEPL PSHLLSGLQR LCQSGSDEIN
RMGILDRSVG KLFAQAVEGL LTKSGVDRHQ IMAIGSHGQT VRHMPNLELG FTLQIGDPNT
IAALTGIDVI ADFRRKDIAL GGQGAPLVPA FHQQLFARTG HQRMILNIGG ISNITYLPGD
ASAVIGFDNG PGNTLIDTWI KQVQGEAYDK DGAWAASGKT DEQLLKQMLS HSYFSLSAPK
STGRELFNQA WLEQQTSDFG YLHESDIQST LLDLTCHSIA NDCLKLTEKA ELYVCGGGAF
NTELLTRLAA LLPGYQVHTT ASLGVDPQWV EGIAFAWLAM RHKLGLPGNL PAVTGASRET
VLGGLFPGN
|
|---|
| |