| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1006 |
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| Symbol | |
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| ID | 4920785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1163002 |
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| End bp | 1163943 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162539 |
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| Product | ErfK/YbiS/YcfS/YnhG family protein |
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| Protein accession | YP_001093136 |
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| Protein GI | 127511939 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000114472 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTA AATTGCTGTT GCTCATCTTG AGTCTCGCAC CACTGCAGTT ACTTGCTAAT
GTCTATTCCC TGCCGGCCAA TGGCGGCCGC CTCATCGGTG AGCTGCAGAC CCATGTGGTC
GAGAAGGGCG ACTACTTCAA AACCATCGCC GATAAATACA ATATCGGTAT CTTGGAGTTG
ATGGAAACCA ATCCTGGGGT GGATCCTTTC CTGCCGACTC CGGGCACCCA GTTAGTGATC
CCCACCCAGA TGTTGCTGCC GGATGTGCCG CGCAAGGGCA TAGTGATCAA CCTGCCGGAG
CTGCGTCTCT ACTATTTCCC TAAGAATGGC CGCGAGGTGC ATGTCTTCCC CGTGGGCATT
GGCCGTATCG GCCGTGAAAC CCCAGAGATG ACCACCAAGA TTAAGGCGCG TATCCCTAAT
CCGAGCTGGA CACCGCCGGC GAGCCTGCGC GCCGAGCACC TGCGTGAGCG CGGCGAGGTG
TTGCCGCCCG TGGTGCCTGC TGGCCCGGAT AACCCACTGG GTAAATACGC CATGCAGCTC
TCCTATGGCG ATGGCAGCTA CCTGATCCAC GGCACCAACA AGGATTTCGG TATCGGCATG
CGCGTCAGCG CCGGCTGTAT CAGACTCAAC CCAGATGATA TAGAGTGGTT GTTCCATCAG
GCCAAATATG GCGACAGCGT GCGGGTGATC AACCAAACGG TAAAGATTGC TACCGAGCCC
GATGGCCGTC AGATCATCGA GGTGCATTCG CCCCTGTCAA AGACGGAAGA TCAGCCCCGT
GAGAAGGTGA TCAGCCTGAG CAGCAAGGTG GTGAAATTTA TCAGCCAGGA AAGCGTCGAC
AACACCAAGG CAAACGATGC CCTGCTGACC CAGAACGGCA TCCCTATGGT GATCTCACAT
CCACCGCTAA CGGCGGCTCA GGATTTAGAG ATCACTCCCT AG
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| Protein sequence | MMRKLLLLIL SLAPLQLLAN VYSLPANGGR LIGELQTHVV EKGDYFKTIA DKYNIGILEL
METNPGVDPF LPTPGTQLVI PTQMLLPDVP RKGIVINLPE LRLYYFPKNG REVHVFPVGI
GRIGRETPEM TTKIKARIPN PSWTPPASLR AEHLRERGEV LPPVVPAGPD NPLGKYAMQL
SYGDGSYLIH GTNKDFGIGM RVSAGCIRLN PDDIEWLFHQ AKYGDSVRVI NQTVKIATEP
DGRQIIEVHS PLSKTEDQPR EKVISLSSKV VKFISQESVD NTKANDALLT QNGIPMVISH
PPLTAAQDLE ITP
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