| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1004 |
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| Symbol | |
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| ID | 4920564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1161251 |
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| End bp | 1162051 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162537 |
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| Product | undecaprenyl pyrophosphate phosphatase |
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| Protein accession | YP_001093134 |
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| Protein GI | 127511937 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
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| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00218186 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTT TTCAGGTAAT AGTCTTGGCC CTTATCCAAG GCCTGACTGA GTTTTTACCT
ATTTCTAGCT CTGCCCACCT CATCTTACCC GCCCAGCTGC TTGGCTGGCA GGACCAGGGG
CTGACCTTCG ACGTGGCGGT GAATACCGGA TCCTTATTGG CCGTGGTGAT CTATTTTCGC
CGTGAGCTCT TCTCCATGTT TACCGCTTGG ACCAGCAGTC TGGTGACGCG TCAGCAGACT
CAGGAGAGCA AGCTGGCCTG GTGGATCATT CTGGCAACCA TTCCTGCGGT GATCTTTGGC
TTTACCGCCA AAGACTTCAT CTCGACTCAT CTGAGAAACA TCGAGGTGAT CGCGACAACG
ACTATCGTCT TCGGCCTGCT GCTGTGGTGG GCGGATAAGT TAAACCGAGA AGGTTTTAGC
GAGTTTCAGG TGGGCTGGAA GAAGGCGCTA CTTATTGGCT TCGCTCAAGC GATGGCGCTT
ATCCCAGGTA CCTCACGCTC AGGTGCAACC ATTACCGCGG CCTTAGCTCT GGGCCTAAGC
CGTGAGGCGG CGGCGCGCTT CTCGTTTCTC ATGTCTGTGC CCGTCAGCCT GGGCGCGGCC
ATCTTGGTGG TGAAAGATCT GCTCTCCAGT CAGGAGGCGA TCGATTATCA GGCGCTGGTC
TTGGGTACGG CGCTGTCATT TGTGGCCGCC TATCTCTGCA TCCACTACTT CCTGAAGATC
ATCAGCCGCA TGGGGATGAC GCCTTTCGTT ATCTATCGTC TCGCCTTAGG GGCTATCCTG
TGTGTAGTGA TTTTTGCCTG A
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| Protein sequence | MDIFQVIVLA LIQGLTEFLP ISSSAHLILP AQLLGWQDQG LTFDVAVNTG SLLAVVIYFR
RELFSMFTAW TSSLVTRQQT QESKLAWWII LATIPAVIFG FTAKDFISTH LRNIEVIATT
TIVFGLLLWW ADKLNREGFS EFQVGWKKAL LIGFAQAMAL IPGTSRSGAT ITAALALGLS
REAAARFSFL MSVPVSLGAA ILVVKDLLSS QEAIDYQALV LGTALSFVAA YLCIHYFLKI
ISRMGMTPFV IYRLALGAIL CVVIFA
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