| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1002 |
|---|
| Symbol | |
|---|
| ID | 4920941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1160367 |
|---|
| End bp | 1160720 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640162535 |
|---|
| Product | dihydroneopterin aldolase |
|---|
| Protein accession | YP_001093132 |
|---|
| Protein GI | 127511935 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1539] Dihydroneopterin aldolase |
|---|
| TIGRFAM ID | [TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00980814 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGG TACTTATTTC ACAGCTTAAA GTCGAAACCG TGATCGGTAT TTACGAGTGG
GAAAAGCAGA TCCATCAAAA CCTGCTGATC GACCTCGAGA TGGCCTGGGA CAACAGTCTG
GCGGCCGCCA ACGACGACTA TCAACATGCC CTGTGTTACG AGACCGTCTC AAATCGGCTC
ACGGCCCTGA TCACCGAGAA GCCGATAGAA CTAATCGAGA CGGTAGCGCA GATCTGCGCC
GACTGCGTCA TGGATGAGTT TGACGTGCCT TGGGTGAAGG TGAGGGTGAT GAAGCCCGGC
GCCGTGCCCA GCGCGCAGGC CGTGGGTGTC GAGATAGAGC GAGGTCATCT GTAA
|
|---|
| Protein sequence | MDKVLISQLK VETVIGIYEW EKQIHQNLLI DLEMAWDNSL AAANDDYQHA LCYETVSNRL
TALITEKPIE LIETVAQICA DCVMDEFDVP WVKVRVMKPG AVPSAQAVGV EIERGHL
|
|---|
| |