| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1001 |
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| Symbol | |
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| ID | 4923173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1159459 |
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| End bp | 1160070 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162534 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsY |
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| Protein accession | YP_001093131 |
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| Protein GI | 127511934 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0344] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0144207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGCTTAA CGCTGCTGAC TCTAGCGATG ATATTGACCG CCTACCTGGC AGGCTCGATA
TCCAGTGCCG TGCTAGTTTG TCGACTCAGA GGGTTACCCG ATCCTCGTAG CCAAGGCTCA
GGCAATCCAG GCGCAACCAA TGTGCTGCGT ATCGGTGGCG CCAGCGCCGC CGCCATGGTG
TTGCTGTTCG ATATGCTCAA GGGCGCGGTG CCCGCCTATG TCGCTTTCCG TCTCGGCGTC
GATGCCGTCT CCCTCGGGGT GATCGCCATC GCCGCCTGTC TGGGGCATAT CTTCCCCATC
TTCTTTAAGT TTAAGGGCGG CAAGGGCGTT GCGACCGCCT TCGGCGCCAT GGCGCCCATA
GGTGCCGATC TGTCTCTGGC ACTGATCGCC ACCTGGGTCA TAGTGGTACT GATCTGCCGC
TACTCATCAC TGGCCGCCAT AGTCACCGCC CTGCTGGCCC CCGCCTATAC CTGGTATTTC
GACGAGCGCT TTACCGTGCC CGTGGCCATG CTCTCCTTGC TGATCATCAT ACGCCACAAG
GAAAACATTC ATCGCCTACT CAAGGGCGAA GAGTCAAAGG TATCACGCAA GAAGCGCACC
GACGGCAACT AA
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| Protein sequence | MSLTLLTLAM ILTAYLAGSI SSAVLVCRLR GLPDPRSQGS GNPGATNVLR IGGASAAAMV
LLFDMLKGAV PAYVAFRLGV DAVSLGVIAI AACLGHIFPI FFKFKGGKGV ATAFGAMAPI
GADLSLALIA TWVIVVLICR YSSLAAIVTA LLAPAYTWYF DERFTVPVAM LSLLIIIRHK
ENIHRLLKGE ESKVSRKKRT DGN
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