Gene Shew_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0983 
Symbol 
ID4924098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1133264 
End bp1134601 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content48% 
IMG OID640162515 
Productamidohydrolase 
Protein accessionYP_001093113 
Protein GI127511916 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT TGCTTGGATG TTTGATCTCT GTTGTTTTTC TAATAACCGC ACTTCCCGGA 
TTTTCGCAGG AAACTGAAGC TGTCACTTTA TTTACCAATG TGAATGTCTT CGACGGTGTA
CATGAGAAGT TGATTAAAAA TACTAACGTA GTGGTAACGG GTAATGTGAT CACCAAGATC
TCTAACGAGC CCCTAATGGT AGCCGGCGGC AAAGTCATCG ATGGCGGTGG CCGTACCCTG
ATGCCTGGGT TGACGGATGC GCATTGGCAT GTGATGCATG CCCATATTGC TAGCATGCAA
ATCTTTGTGA ATGACATTGG CTATCTGACA CTGGCGGGAG CAGAAAGCGC CGAGGCAACA
TTAATGCGGG GTTTTACAAC GGTTCGAGAT ATGGGAGGTC CAGTTTTTGG CATTAAGAAG
ATGATCGATG AGGGACGATA TGTGGGGCCA AGAATTTATC CTTCAGGGGC CTATATTACA
CAGACTTCCG GTCATGGGGA TTTCCGCTTT CCGACAGCAA TGCCAAGGAA GGATGGCAGA
GAATTGCTTG ATGGGGAAAT GATGGCATGG ACAGCCGTCG CAGACGGAGT GCCTCAGGTG
CTGAGACGAG TGCGCGAGAA TTTAATGCGA GGCGCCTCTC AGATAAAGGT CATGGCAGGT
GGTGGCGTAG CGTCACTAAG TGACCCCTTG GATGTCAGGC AATATACGTT TGAAGAAATG
AAGGCTGCAG TGGATGCGGC TGCGACTTGG AACACCTATG TCGCTGTGCA TGCATACTCA
GATTACGCGG TCCGTGGTGC CCTGGAAGCG GGAGTCCAAT CTATCGAGCA CGGACAGATG
ATAACGGAAG ACACCGCAAA ACTGATTAAG AAAAAGGGGG CTTGGCTTAG CTTGCAACCC
CTGCTGAATG ATGAAGACAG AGTGCCATTT CCTGAGGATT CTTTCGAAAA TAAAAAATTC
TTAGCAATGA CCGCTGGCAC GGAGAAAGCC TACGAGCTGG CCAAAAAATA TAATCTGAAA
CTTGCCTTTG GCACAGATCT GCAAAACGGT GCGGCAATAG CTGCTAAACA GGGCAAATCA
CTGGCAAAAC TTACTCGGTG GTATGAGCCA TGGGAGGTTC TGAAAATGGC TACCAGCGCC
AATTATGAGC TCTTTAAAAT GTCGGGCCCG AGAGATCCCT ATCCTGGTGA GAATGGCGTG
ATCAAGGAGG GAGCCTTGGC TGATATTATT TTAGTGAACG GTAATCCGCT CGAGAACATC
GATCTCATTG CCGATCCGGA GAAGAACTTC GTCATCATTA TGAAGGACGG CAAGATCTAC
AAGAATACGC TGCAGTAG
 
Protein sequence
MNKLLGCLIS VVFLITALPG FSQETEAVTL FTNVNVFDGV HEKLIKNTNV VVTGNVITKI 
SNEPLMVAGG KVIDGGGRTL MPGLTDAHWH VMHAHIASMQ IFVNDIGYLT LAGAESAEAT
LMRGFTTVRD MGGPVFGIKK MIDEGRYVGP RIYPSGAYIT QTSGHGDFRF PTAMPRKDGR
ELLDGEMMAW TAVADGVPQV LRRVRENLMR GASQIKVMAG GGVASLSDPL DVRQYTFEEM
KAAVDAAATW NTYVAVHAYS DYAVRGALEA GVQSIEHGQM ITEDTAKLIK KKGAWLSLQP
LLNDEDRVPF PEDSFENKKF LAMTAGTEKA YELAKKYNLK LAFGTDLQNG AAIAAKQGKS
LAKLTRWYEP WEVLKMATSA NYELFKMSGP RDPYPGENGV IKEGALADII LVNGNPLENI
DLIADPEKNF VIIMKDGKIY KNTLQ