Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0983 |
Symbol | |
ID | 4924098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1133264 |
End bp | 1134601 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640162515 |
Product | amidohydrolase |
Protein accession | YP_001093113 |
Protein GI | 127511916 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAT TGCTTGGATG TTTGATCTCT GTTGTTTTTC TAATAACCGC ACTTCCCGGA TTTTCGCAGG AAACTGAAGC TGTCACTTTA TTTACCAATG TGAATGTCTT CGACGGTGTA CATGAGAAGT TGATTAAAAA TACTAACGTA GTGGTAACGG GTAATGTGAT CACCAAGATC TCTAACGAGC CCCTAATGGT AGCCGGCGGC AAAGTCATCG ATGGCGGTGG CCGTACCCTG ATGCCTGGGT TGACGGATGC GCATTGGCAT GTGATGCATG CCCATATTGC TAGCATGCAA ATCTTTGTGA ATGACATTGG CTATCTGACA CTGGCGGGAG CAGAAAGCGC CGAGGCAACA TTAATGCGGG GTTTTACAAC GGTTCGAGAT ATGGGAGGTC CAGTTTTTGG CATTAAGAAG ATGATCGATG AGGGACGATA TGTGGGGCCA AGAATTTATC CTTCAGGGGC CTATATTACA CAGACTTCCG GTCATGGGGA TTTCCGCTTT CCGACAGCAA TGCCAAGGAA GGATGGCAGA GAATTGCTTG ATGGGGAAAT GATGGCATGG ACAGCCGTCG CAGACGGAGT GCCTCAGGTG CTGAGACGAG TGCGCGAGAA TTTAATGCGA GGCGCCTCTC AGATAAAGGT CATGGCAGGT GGTGGCGTAG CGTCACTAAG TGACCCCTTG GATGTCAGGC AATATACGTT TGAAGAAATG AAGGCTGCAG TGGATGCGGC TGCGACTTGG AACACCTATG TCGCTGTGCA TGCATACTCA GATTACGCGG TCCGTGGTGC CCTGGAAGCG GGAGTCCAAT CTATCGAGCA CGGACAGATG ATAACGGAAG ACACCGCAAA ACTGATTAAG AAAAAGGGGG CTTGGCTTAG CTTGCAACCC CTGCTGAATG ATGAAGACAG AGTGCCATTT CCTGAGGATT CTTTCGAAAA TAAAAAATTC TTAGCAATGA CCGCTGGCAC GGAGAAAGCC TACGAGCTGG CCAAAAAATA TAATCTGAAA CTTGCCTTTG GCACAGATCT GCAAAACGGT GCGGCAATAG CTGCTAAACA GGGCAAATCA CTGGCAAAAC TTACTCGGTG GTATGAGCCA TGGGAGGTTC TGAAAATGGC TACCAGCGCC AATTATGAGC TCTTTAAAAT GTCGGGCCCG AGAGATCCCT ATCCTGGTGA GAATGGCGTG ATCAAGGAGG GAGCCTTGGC TGATATTATT TTAGTGAACG GTAATCCGCT CGAGAACATC GATCTCATTG CCGATCCGGA GAAGAACTTC GTCATCATTA TGAAGGACGG CAAGATCTAC AAGAATACGC TGCAGTAG
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Protein sequence | MNKLLGCLIS VVFLITALPG FSQETEAVTL FTNVNVFDGV HEKLIKNTNV VVTGNVITKI SNEPLMVAGG KVIDGGGRTL MPGLTDAHWH VMHAHIASMQ IFVNDIGYLT LAGAESAEAT LMRGFTTVRD MGGPVFGIKK MIDEGRYVGP RIYPSGAYIT QTSGHGDFRF PTAMPRKDGR ELLDGEMMAW TAVADGVPQV LRRVRENLMR GASQIKVMAG GGVASLSDPL DVRQYTFEEM KAAVDAAATW NTYVAVHAYS DYAVRGALEA GVQSIEHGQM ITEDTAKLIK KKGAWLSLQP LLNDEDRVPF PEDSFENKKF LAMTAGTEKA YELAKKYNLK LAFGTDLQNG AAIAAKQGKS LAKLTRWYEP WEVLKMATSA NYELFKMSGP RDPYPGENGV IKEGALADII LVNGNPLENI DLIADPEKNF VIIMKDGKIY KNTLQ
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