| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0969 |
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| Symbol | |
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| ID | 4922047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1112831 |
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| End bp | 1114135 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162501 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001093099 |
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| Protein GI | 127511902 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA AGCGCCCTGT CCACAGTGAC CAATATCCCG ACTCTTTCTA TCATGCCACC
GCCAATGCCC TGGAAGCCCT GCCGCAACTC AAAGAGCGGA TCAGCGCCGA TGTCTGCATC
GTCGGCGGCG GTTTCAGCGG CATCAACACC GCCATCGAGT TGGCCGAGAG AGGCTTCGAG
GTAGTATTGC TCGAGGCGAA ACGGATCGGC TGGGGCGCGT CGGGCCGTAA CGGCGGCGAG
CTGATCCGTG GCATAGGCCA TAATGTCGAA CAGTTCCGCA ACGAGATAGG CTCCGAAGGC
GTCGAGGCCA TCGAGCGGAT GGGCTTCGAG GCGGTCGAGA TAGTGCGTAA CCGCGTCGCC
AAACACAATA TCGACTGTAA CCTGCAGATG GGCTACTGCG ATCTGGCCAC CAAGCCGAGA
CACATGAAGG AGCTCGCCGC CGACTATCAG GAGATGCTCC ATCAGGGACG CGAGGGCTTT
AAGCTGCTGG AGAAGCACCA GCTTGGCGAA GTGATCGGCT CAGATCTCTA CTGCGGCGCT
CTGGTCGACA TGAACAGCGG CCATCTGCAT CCCCTCAATC TGGCACTGGG CGAGGCCAAG
GTGGCCCGCA GCCTGGGGGT CAAGATGTTC GAATACAGCG CCGCCACCAA GATAGTCAAG
GGCGAGCGCC CCTGCGTACA TACGGAGCAT GGCCGTGTCG ACTGTCGCTA CCTGGTGCTC
GCCGGTAACG CCTATATCGG CCATGAACTC AACGGCTACA TAGGCGGTAA GGTGCTGCCC
GCCGGCAGTT ATCTGCTGGC CACCGAGCCT TTGTCCCAGG AGATGTGCGA TGAGATTATC
CCGCAAAACA TGGCCTTCGC CGACATGCGT ATCGATCTCG ACTATTTCCA CCTCTCCCAG
GACAATCGCC TACTGTTTGG CGGCCTGTGC ACCTATTCGG GTAAAGATCC CAAGGATATC
GACGCGGCGC TGCGCCCCAA CTTGGAGAAG GTGTTCCCCC AGCTCAAGGG GGTGAAGATA
GAATATGAAT GGGGCGGCAT GATAGGCATA GGCGCCAACC GCCTGCCACA GATTGGCCGG
CTGCCAGACT GCCCCAACAT CCTCTACGCC CAGGCCTATG CCGGCCACGG CGTCAATGCC
ACCCATATGG CCGCCAGGCT CATCGGCGAA GCCCTGACGG CTCAGGCCGA AAGGTTCGAT
ATCTTCGACA GGGTACAACA CATGACCTTC CCCGGCGGGC CGAGATTTCG CTCCCCCATG
TTGGCGGCGG GCATGCTGTA TCACAGGCTG AAAGACCTGT TTTAG
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| Protein sequence | MTTKRPVHSD QYPDSFYHAT ANALEALPQL KERISADVCI VGGGFSGINT AIELAERGFE
VVLLEAKRIG WGASGRNGGE LIRGIGHNVE QFRNEIGSEG VEAIERMGFE AVEIVRNRVA
KHNIDCNLQM GYCDLATKPR HMKELAADYQ EMLHQGREGF KLLEKHQLGE VIGSDLYCGA
LVDMNSGHLH PLNLALGEAK VARSLGVKMF EYSAATKIVK GERPCVHTEH GRVDCRYLVL
AGNAYIGHEL NGYIGGKVLP AGSYLLATEP LSQEMCDEII PQNMAFADMR IDLDYFHLSQ
DNRLLFGGLC TYSGKDPKDI DAALRPNLEK VFPQLKGVKI EYEWGGMIGI GANRLPQIGR
LPDCPNILYA QAYAGHGVNA THMAARLIGE ALTAQAERFD IFDRVQHMTF PGGPRFRSPM
LAAGMLYHRL KDLF
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