Gene Shew_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0968 
Symbol 
ID4922046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1111913 
End bp1112767 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content57% 
IMG OID640162500 
Product3-mercaptopyruvate sulfurtransferase 
Protein accessionYP_001093098 
Protein GI127511901 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGG AATACCCGTT AGTTACCACC GCCTGGCTTG AGGCGAATCT GTTTGAGGGT 
AATCTGGTGT TGCTCGACGC CAGTATGCAG AGTGTGGTGG GCAAGGAACC CATACTCTAT
GATGAGTTTG TCTGTATTCC CCGGTCGCAA AAGTTTGATA TCGAACAGGT GTTTTGCGAT
ACCACTTCAT CGCAGCTGCA CGCGATGCCC ACCCCTGAGC AGTTTGAGCA AGGGGCTACG
GCGCTGGGCA TAGACAGAGA CAGCCTGGTG GTGATCTACG ATAATCAGGG GATCTACAGC
GCGCCGCGCG CCTGGTGGAT GTTTAAGCTG ATGGGCCATG AGAATGTCTA TGTGCTCGAT
GGCGGCCTGC CCCAGTGGCT CAGCGAGGAG CGCATGACCA GCGAGAGCTA TCAGCCCACG
GTAATAGATG AAGAGTCTGT GCCCTATGTG GCGGATTTCC AGCCGGGCCT TATCTGTGAC
GCCAACTATG TGCTCGAATC CCTGGGAGGC GACAGTGTTA TCTTGGATGC GCGGGCAGCG
GGGCGTTTCG CCGGTGAGGT AAGTGAGCCC AGATCAGGCG TGCGCTGCGG TCATATTCCC
GGCTCGGTAA ACCTGCCTTT TGGCGAGCTG CTGCGCGAAC ATAGGATGAA GCGGGTCGAG
GATCTGCAGG CCATGTTTGA GCAGCTAGTG GGCGAGCAGG AAGCAGAGCG GATCTTCAGC
TGCGGCTCAG GCATTACCGC CTGTATCCTG ATCTTAGCCT CTGTGGCCTC GGGACATGAC
AAGGCGGTGC TCTACGATGG CTCCTGGGCC GACTGGGGCA GCAATGCCGA TTTGCCTATT
GAGCAAGGGG CGTAG
 
Protein sequence
MELEYPLVTT AWLEANLFEG NLVLLDASMQ SVVGKEPILY DEFVCIPRSQ KFDIEQVFCD 
TTSSQLHAMP TPEQFEQGAT ALGIDRDSLV VIYDNQGIYS APRAWWMFKL MGHENVYVLD
GGLPQWLSEE RMTSESYQPT VIDEESVPYV ADFQPGLICD ANYVLESLGG DSVILDARAA
GRFAGEVSEP RSGVRCGHIP GSVNLPFGEL LREHRMKRVE DLQAMFEQLV GEQEAERIFS
CGSGITACIL ILASVASGHD KAVLYDGSWA DWGSNADLPI EQGA