Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0968 |
Symbol | |
ID | 4922046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1111913 |
End bp | 1112767 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640162500 |
Product | 3-mercaptopyruvate sulfurtransferase |
Protein accession | YP_001093098 |
Protein GI | 127511901 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATTGG AATACCCGTT AGTTACCACC GCCTGGCTTG AGGCGAATCT GTTTGAGGGT AATCTGGTGT TGCTCGACGC CAGTATGCAG AGTGTGGTGG GCAAGGAACC CATACTCTAT GATGAGTTTG TCTGTATTCC CCGGTCGCAA AAGTTTGATA TCGAACAGGT GTTTTGCGAT ACCACTTCAT CGCAGCTGCA CGCGATGCCC ACCCCTGAGC AGTTTGAGCA AGGGGCTACG GCGCTGGGCA TAGACAGAGA CAGCCTGGTG GTGATCTACG ATAATCAGGG GATCTACAGC GCGCCGCGCG CCTGGTGGAT GTTTAAGCTG ATGGGCCATG AGAATGTCTA TGTGCTCGAT GGCGGCCTGC CCCAGTGGCT CAGCGAGGAG CGCATGACCA GCGAGAGCTA TCAGCCCACG GTAATAGATG AAGAGTCTGT GCCCTATGTG GCGGATTTCC AGCCGGGCCT TATCTGTGAC GCCAACTATG TGCTCGAATC CCTGGGAGGC GACAGTGTTA TCTTGGATGC GCGGGCAGCG GGGCGTTTCG CCGGTGAGGT AAGTGAGCCC AGATCAGGCG TGCGCTGCGG TCATATTCCC GGCTCGGTAA ACCTGCCTTT TGGCGAGCTG CTGCGCGAAC ATAGGATGAA GCGGGTCGAG GATCTGCAGG CCATGTTTGA GCAGCTAGTG GGCGAGCAGG AAGCAGAGCG GATCTTCAGC TGCGGCTCAG GCATTACCGC CTGTATCCTG ATCTTAGCCT CTGTGGCCTC GGGACATGAC AAGGCGGTGC TCTACGATGG CTCCTGGGCC GACTGGGGCA GCAATGCCGA TTTGCCTATT GAGCAAGGGG CGTAG
|
Protein sequence | MELEYPLVTT AWLEANLFEG NLVLLDASMQ SVVGKEPILY DEFVCIPRSQ KFDIEQVFCD TTSSQLHAMP TPEQFEQGAT ALGIDRDSLV VIYDNQGIYS APRAWWMFKL MGHENVYVLD GGLPQWLSEE RMTSESYQPT VIDEESVPYV ADFQPGLICD ANYVLESLGG DSVILDARAA GRFAGEVSEP RSGVRCGHIP GSVNLPFGEL LREHRMKRVE DLQAMFEQLV GEQEAERIFS CGSGITACIL ILASVASGHD KAVLYDGSWA DWGSNADLPI EQGA
|
| |