Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0935 |
Symbol | |
ID | 4920570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1069130 |
End bp | 1072729 |
Gene Length | 3600 bp |
Protein Length | 1199 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640162467 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_001093065 |
Protein GI | 127511868 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.755252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAA GTCGTAGAAA TTTGTTACTG AGTGCACTCT CGGTTGCCAT CGCCAGCGCT TGCTATGCCA ACCCTGGCGC CGCAAGCTTT AGCGATGATA CCAAGCCACT GCAAACCATT ATTCCCGGCC AAGAAAAACT CAAACTCGAA CGCGCCGATA AACAACGCAG CGACGGCATG TACTTCGTCC GCTTCAAGGA AGCCCCGGTC GCCAGCTATG ATGGCTCGCT GGCGGGCTTT GCCGCCACCA ATATTCAAGT CAACCAGTCA AACAAGCAGG CATCTGGTCT GCTGAACAGC CAGTCTAAGG CCAGCCTGCA ATACAGAGGC TACCTGAAAC AGCAGCAAGC CAAGATCAAG CAGAGACTAA ACGGCAAACT CAAACGTATT CTGACCCCGA CCCAGGAATA CCAGCTGATC GTCAACGCCA TGGCGGTAAA GCTTAAGCCG GGTGAGGCCG ACATCATAGC CAAAGACCCT GAGGTTTTGA GTGTCGAGCC CATAGGCCTG CACTTTATTC AAACCTCCAC CGGGCCCGAA TTTATCGGCG CCAAGCAGGT CTGGCAGGGC GATGAAATCG TCGAGGCTAC TAAGGGGGAA GGGGTTATCG TTGGCGTGAT GGACACAGGG ATCAACGCCA ATCACCCCTC CTTTGCTGAG GTGGGCGCCG ATGGCTACCA GCACAAGAAC CCCCTAGGCG ACGGCCAGTA CCTGGGGGAT TGCCAGCAGT ACAGTCAGTT TTGTAACGGC AAACTCATAG GCATCATCAG CTATCCCGAG CTTATCCAAT ATCGTCAGGA CACGGCCGAC AGCCTGGACG ATCCCGCCTA TGAGGATCTC GCCAACAAGG TCAAGGTGGG CTATGACTTC AACGGACACG GCTCCCACGT GGCCTCTACC GCGTCGGGCA ATATACTGCA CGACGTCAAC TTCTATCTGC AGGTGCAGGA GGAGGATGGC ACTATCATCG CCGAAAAGAG CGCCTTCGAA TTTGACGCCA TCAGCGGCGT AGCTCCCCAT GCCAACTTGG TTTCTTACCA AGTGTGTGAC GATGCCGGCT CCTGTTATCC GGAATTTACC CTCAAGGCGA TTGAACATGC CATAGAAAAC GGGGTACAGG TGCTCAACTA CTCTGTGGGC GGCTCGGCCA AAGACCCTTG GTCCTCCATC GACGCCGAAG CCTTCCTCAA CGCCCGCGAG GCGGGTATTC ATGTGGCGGT GGCCGCGGGT AATGCGGGCC CAAGCGCCAG CACAATAGGT TCGCCGGGAA ACGCCCCCTG GGTGACGACG GTCGCCGCCT ACACCCACGA TCTCGAGTTT AAACAGAAAT CCCTCACCAA CATGAATGGC GGCGAGACGC CACCCGCCGA CATGATGGGC TTTGGCGTGA CCAAAGGGGT GAGCGGCAAG GTGGTTCTGG CGGCCAGCGT CAATTCCGAC AACGCCCAGT GCACCGACCC TTTCGAGGCT GGCAGCTTCG ATGGTGAGAT CGTCGTCTGT GAACGCGGAA CCAACGCGCG GGTGCGCAAG GGGATCAATG TTAAAGAAGG CGGCGCCGGC GGCATGATCT TGATAAACAT GCCTGATGGT GTAGATTCGC TGCACAATGA CAACCATGTT CTGCCTGCCA TTCAGCTTAA TGCCGCCGAT GGCGAGCGTC TGACCCAGTG GCTGGCCAGC GGTGAAGGTC ACCAGGCGAC AATTGAAGCC TCAGAAACCA CCAGAAACGC CAGCCTGGGT GATATCGCCG GGGTCTTCAC CTCTCGCGGG CCTAACCTGC CCTATCCCAA CATCTTCTCG CCAGATATCG CCGCGCCCGG GGTCGATATC TACGCCGCCA ACGCCGAAGA CAGGCTGTTC GAGGGGCAGA TTGGCCATAT TCCATTCGCC AGCTTGTCCG GCACCTCTAT GGCCACGCCC CATGTGACCG GCGCCTATGC CCTGCTTAAG GCCGCGCATC CAGACTGGAC ACCGGCTCAG GCGCAATCGG CCTTCATGAG CACCGCCCAT CAGACCACCT ACAAGGACGA TGACTATGAT GGCACCCTAG AACGCTCCGA CTTCTTCGAC CAGGGCGCGG GCAGCCTGCG TATCAACCAG GCATTAAAGG CAGGCCTGCT GCTGGATATC GACAAGGCTG GATATCTGGC GGCTAATCCT GAGATGGGCG GCGATCCCAG TGCGCTCAAC ACCAGCTCCA TGGTGCAAAA CCAGTGTATC TCCAACTGCA GCTGGACCCG CACCGTCACC GCGACCCAGG CCAGCAGCTG GAGCGCCGAG TATGAATATC TCAATCCAGG CTTCACCCTG GAGGTGACCC CATCGAGCTT CTCCCTCAAC GCGGGGGAAT CTCAGGTGCT CACCATCAAG GCGACCGCCA ACATTAACCT GGTGGATGAG TGGGTGCACG GCTACATCAA GCTTAACAAT GCCGATACCA GCATGAGCGA CACCCACCTG CAGGCCACCA TAGGCTTCAA GGCCGGCCAG GTGGCCGAGG AAGTCAGCGC CGAGATGAAC AATGTCGACA ACCAGCTGGT GATCGAAGAT ATCTTCACCT CGGGCAGTAA TGCACTCCAG GTCAAGGGCT TCGGCCTGTA TAAGGCGCAG TCCTTCACTG GCAGCGCGAT TGGCTCCTCT AACGATGCCG AGCGTGGCAG CCCGCACTCG AATCCTGAGG TGATCTTCAG CGTGCCGACC GTGGTCAAGC CCTACACCAA ACGCCTGGTC GTAGAGATAA CCGACACCAC CTCACCCGAC ATGGATCTCT ATGTCGGCAT AGATGAGAAC GGTGACGGCA TGCCTGATGC CTATGAGATG TACTATTCAC TGCTCTGTCT GAGCGGCGAG GTAGACTCTA AGGAGCGCTG CATCCTGGAA AACCCGCCAA CCGGCAACTA TTGGATATTT GCCCACAACT ATGAGGGCAG GGTCGAGGAT GAAGCCGACG AGGTGACCTT GGAGATCACC CATGTGAACT ACAGCAATCA GGCGAGTTTC GACATCACGG CGCCAAGTCA GGTAGCACAG GATGAGCGCT TCGACGTGAG CCTGTCGGTC AACGGCTATC TGGATGACAG CCTGAGTCTG CAGCCGCTTG AAGCCGGCGA GACCTACTAT GGCCTGCTCG AGATGGGCAC CACAAGCGAG CTTAAGCGCA ACATAGGCGC CACCCTGATC AAGGTAAAAG GCCTAGAGCC GGTTGAGGTG CCGCAAAACA CCGCGCCCGT GCTGGCCAAT CCGATTGCCG ACCTTCAGAC CCAGCTAAGC GAACAGGGCA GCGCAGTGGT CAGCCTAGAT CTCAGCCAGG TCTTTAGCGA CGCCGAGGGC GATACCCTCA CGCTATCGGC GACGGGTGTC GAAGGGATAA CCTTAGATGG TACTCAGCTT GAGATGAACT TTACCGCCAG CGGCGAATAC CCAATTGTCA TCTCGGCCAG CGACGGGGAA CTCAGCACAG AGACGCAATT TACCGTCACT GTGACAGCGG CGCCGATAGT ACCTGTCGAG CCACCGAGTG AATCGAGTGG CGGCGGCAGC CTAGGTTACT TCACCCTGCT ACTGCTTGGT CTCTCAGGCC TTAGACGCCG CCAGCGCTAA
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Protein sequence | MKSSRRNLLL SALSVAIASA CYANPGAASF SDDTKPLQTI IPGQEKLKLE RADKQRSDGM YFVRFKEAPV ASYDGSLAGF AATNIQVNQS NKQASGLLNS QSKASLQYRG YLKQQQAKIK QRLNGKLKRI LTPTQEYQLI VNAMAVKLKP GEADIIAKDP EVLSVEPIGL HFIQTSTGPE FIGAKQVWQG DEIVEATKGE GVIVGVMDTG INANHPSFAE VGADGYQHKN PLGDGQYLGD CQQYSQFCNG KLIGIISYPE LIQYRQDTAD SLDDPAYEDL ANKVKVGYDF NGHGSHVAST ASGNILHDVN FYLQVQEEDG TIIAEKSAFE FDAISGVAPH ANLVSYQVCD DAGSCYPEFT LKAIEHAIEN GVQVLNYSVG GSAKDPWSSI DAEAFLNARE AGIHVAVAAG NAGPSASTIG SPGNAPWVTT VAAYTHDLEF KQKSLTNMNG GETPPADMMG FGVTKGVSGK VVLAASVNSD NAQCTDPFEA GSFDGEIVVC ERGTNARVRK GINVKEGGAG GMILINMPDG VDSLHNDNHV LPAIQLNAAD GERLTQWLAS GEGHQATIEA SETTRNASLG DIAGVFTSRG PNLPYPNIFS PDIAAPGVDI YAANAEDRLF EGQIGHIPFA SLSGTSMATP HVTGAYALLK AAHPDWTPAQ AQSAFMSTAH QTTYKDDDYD GTLERSDFFD QGAGSLRINQ ALKAGLLLDI DKAGYLAANP EMGGDPSALN TSSMVQNQCI SNCSWTRTVT ATQASSWSAE YEYLNPGFTL EVTPSSFSLN AGESQVLTIK ATANINLVDE WVHGYIKLNN ADTSMSDTHL QATIGFKAGQ VAEEVSAEMN NVDNQLVIED IFTSGSNALQ VKGFGLYKAQ SFTGSAIGSS NDAERGSPHS NPEVIFSVPT VVKPYTKRLV VEITDTTSPD MDLYVGIDEN GDGMPDAYEM YYSLLCLSGE VDSKERCILE NPPTGNYWIF AHNYEGRVED EADEVTLEIT HVNYSNQASF DITAPSQVAQ DERFDVSLSV NGYLDDSLSL QPLEAGETYY GLLEMGTTSE LKRNIGATLI KVKGLEPVEV PQNTAPVLAN PIADLQTQLS EQGSAVVSLD LSQVFSDAEG DTLTLSATGV EGITLDGTQL EMNFTASGEY PIVISASDGE LSTETQFTVT VTAAPIVPVE PPSESSGGGS LGYFTLLLLG LSGLRRRQR
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