| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0927 |
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| Symbol | |
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| ID | 4920856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1057371 |
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| End bp | 1059119 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162459 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001093057 |
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| Protein GI | 127511860 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACTCA AGAAGATGAT GATTAGCCTG CTTGTTCTTT CGGCCACTGT GTTAGTAGGC
TGCGCAACCA AGAATCCGCC ACAAGGCCTT GAGGCCAATG TCATGCAAGC CGACATGGTG
TTCACCAATG GCAAGATCTA CACAGTCGAT GCCAGCAACT CCTGGGCCGA GGCAATTGCT
ATCAAGGGCG ACAAGATAGT CTATGTAGGC AGCAATGAGG GAGCCGCGCC CTACGTGGGG
AAGTCGACAC AGGCAGTCGA TCTTGCGGGT AAGTTGATGT TACCTGGTTT CGTTGAGGGG
CACTTTCATA CCACCACCCA AGGGATCATA TTGCATGGCC CGGATCTACA GACTGACTCC
ATGGAGGATA TGTTGGCCAA GCTAAAGGCC TATGCCGATG AGAATCCTGA GCTTAACTTT
ATCAATGGCT GGGGCGTTCG CCCCAACACC TATGGCCCTG GGGAGCCGAC GGCGGCCATG
CTCGATGCCG TGATACCCGA CCGACCCGTT TATCTATGGC AGGTGGATGG TCATTCCGCC
TGGGTAAATA CCAAGGCGAT GGAGATGGCG GGCCTGAATA AGGATACGCC GGATACTGTG
CCAGGGGTCT CCTACTTCGA GCGTGATAAG GAGGGCAACC CTACTGGTTA TATCGTCGAA
GTACCGGCGC AAGTTCAGAT ATTTAAGCAT TTTGTCACTA TCAATGATGC CTATATTCGC
GAGGGGATGG CAACTTGGTT TCCTGAATAT ACCAAGGCGG GTATTACCGC CGTCCATGAC
TTTGGTTGGG CCGGGGTGGA CCAGGATACC GCCATAGGCA TTCTCAAAGA TTTCGAGCAA
GACGGCACGC TAACGATTCG CGTATACGGC AGCTTCTATT GGAACGATGC CAGTATAGAT
CCTGTCCCCA TCGCCAAGAA AATGCGCGAC GAGAATCAGA CGGGGCTGGT GCAGGTGAGC
GCCCTTAAGA TCAACATGGA TGGAGACGAT GATAAATACA GTACTCTGTT GGTCGATGGA
TATGCCGATG ACCCTAAGGC AAGTCCTCCA CCTGTGATCC CTTTCGATGT GATTAACGAT
GCCGCCGTGC GGGCTGATAA AGAGAAGCTA AATCTTATCT GCCACTGCTT CGGTGACATG
GCGGTGCGTA AGTTTCTTGA TGCGGTTGAG CTGGCGAAAA ATAGCAACCC TGAGTGGCAG
CGGCGCGCGG TGGCGTCCCA TGCCATCTTA GTGCATCCCG ATGACTATCC ACGATTCAAG
GCTCTTGATG CCACCTATGA CACTACGGGT CAATGGATGG CACTCGATCC ATACACTGGG
GTGATAACGC CCCAACGAAT TGGCGAGGAG CGGATGCAGC GACTCTTCCC CATCAAGGCA
ATACTCGAAG CCGGCGGTAA CGTGTCGCTG GGCTCGGATT TCCCAGCGGC ATCTTATGTG
GCAGATTTTA GACCACTCAA TGCCATCACC CAGGCGGTGA CCCGGCAGAT GCTGGGCGAG
CCGGATATGC CAATCCTAGG CGGTGAACAG ATGCGCCTCA CGGTTGCTCA AGCAATCCGC
GCCAATACCT ATGGCGCTGC CTACGGCATA GGTAAGGAAC AACTCTTGGG GTCACTGGAG
ACCGGAAAGC TGGCGGATCT TATCGTGCTG GATCAGAACC TGTTCGAGAT AGACCCACAC
GAGATCTATA AGGCTAAGGT GCTGCTCACC ATCATGGATG GTAAGGTGAG GTATAGAGAC
GGCATTTAG
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| Protein sequence | MLLKKMMISL LVLSATVLVG CATKNPPQGL EANVMQADMV FTNGKIYTVD ASNSWAEAIA
IKGDKIVYVG SNEGAAPYVG KSTQAVDLAG KLMLPGFVEG HFHTTTQGII LHGPDLQTDS
MEDMLAKLKA YADENPELNF INGWGVRPNT YGPGEPTAAM LDAVIPDRPV YLWQVDGHSA
WVNTKAMEMA GLNKDTPDTV PGVSYFERDK EGNPTGYIVE VPAQVQIFKH FVTINDAYIR
EGMATWFPEY TKAGITAVHD FGWAGVDQDT AIGILKDFEQ DGTLTIRVYG SFYWNDASID
PVPIAKKMRD ENQTGLVQVS ALKINMDGDD DKYSTLLVDG YADDPKASPP PVIPFDVIND
AAVRADKEKL NLICHCFGDM AVRKFLDAVE LAKNSNPEWQ RRAVASHAIL VHPDDYPRFK
ALDATYDTTG QWMALDPYTG VITPQRIGEE RMQRLFPIKA ILEAGGNVSL GSDFPAASYV
ADFRPLNAIT QAVTRQMLGE PDMPILGGEQ MRLTVAQAIR ANTYGAAYGI GKEQLLGSLE
TGKLADLIVL DQNLFEIDPH EIYKAKVLLT IMDGKVRYRD GI
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