Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0924 |
Symbol | |
ID | 4921268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1052477 |
End bp | 1052938 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640162456 |
Product | DNA polymerase III chi subunit, HolC |
Protein accession | YP_001093054 |
Protein GI | 127511857 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2927] DNA polymerase III, chi subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.722324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAACG CCTTGTTTTA CTTGATGCCA CAAGCCAGTT CTGCCGCAAC CAATGTTGCC AAGGCGGAGC AAGAGAGTGT CTATCTTTTC GCCTGCCGAC TCGCCGAGCA GGCGTATCGT GGTCAACAGC TGGTGTATAT CCACTGCAAT GACCAGCAGC AGGCCTATGA AGTTGACGAA ATTTTATGGC AATTTGAACC CAGCGCATTT GTGCCCCATA ACCTCAAGGG CGAAGGGCCG ACGGGTGGCG CACCGGTGGA GATAGGCTTC GATAAATTGG GCCCCAATAA AAATCGTCAC CTTCTGATTA ATCTTGCAGA CCAAGCGCCG CAATTTGCGG TAAACTTTGG CCAGATTATC GACTTCGTTG CCAACGATGC TGCCATGAAA GCGACCGCGC GCGATCGTTA TCGCCAGTAT CGCGAGTTAG GGATCCCCCT GACGACCCAA CAACCAAATT AA
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Protein sequence | MPNALFYLMP QASSAATNVA KAEQESVYLF ACRLAEQAYR GQQLVYIHCN DQQQAYEVDE ILWQFEPSAF VPHNLKGEGP TGGAPVEIGF DKLGPNKNRH LLINLADQAP QFAVNFGQII DFVANDAAMK ATARDRYRQY RELGIPLTTQ QPN
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