| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0918 |
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| Symbol | |
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| ID | 4923962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1037603 |
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| End bp | 1039897 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640162450 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_001093048 |
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| Protein GI | 127511851 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.613412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.552776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA ATAAAATTAC CTTATTAGCC ATGGCACTCT TCTGTGCCAT TGGTGTGAGC
GCGTGTAGTG ATGGTGAAGA TGGTAAAGAT GGAGCACCGG GTGAACCTGG TGTTCCTGGT
ACTCCTGGAA CACCCGGTGC ACCAGCGGGA TCTACCGTTG ATACTGTAGC CACTGCCGCA
GACTTCAAAC TAACTCTACA ACCTGCCGAT ATCGTAGTAG TAGGAGCTGA TGACTTCTCT
ATTAAGTTCA CCGCGACGGG TAAAAATAGT AAAGGAGATG ATGTTCCGTT TACTGGCCTA
GAGAAAGTTG CCCTATATGT GACTAACCAA GTGGCTAACA CCACTAGTAG TGGCGCTCCT
ATGCTCTGGT CGAACAATGC CCTGGCTAAC GAATTTGGTT CTAGCATGTA CTGTACGCCT
ACTGGTAAGG CCGCAGCGCG TGGCGGCGCC GAAGTCGATG CATGTACCTT GGTAGAAGAT
GCTGAAAACC CTGGTACTTA CACAGGTACT TGGGAACATG ATGGTAACGC ACCTGTTGTG
GTAGCCGATG GCGATCCTAA CAGCATGTTC CGTGTCATGA TCCGTACCTA TGATGTGACC
GACGCAACTG GCGTATCGAT TTCCGACAAA CTACTCTCTA CTCCGCTCGA TTTCATTCCT
GCGACCGGTG AGATGGCCGT ATCGGCGAAA GATTCGGTAT CAAGCGCTGC CTGTATTCAG
TGTCACAGTG AGTTGATGGG CTATGATGAT GGCGACAAAC GTATTGCTAA CATCGGTGCT
CACCATAACT ATCAGAAAGT TGAAAACTGT ATCGCGTGTC ATAACCCAGC TTATGCCGCC
GATCAGAACG ATCCAGAAAA AGGCTTTAAC CCTAACTTTA ACGCCATGAT CCACACCATC
CACGCCGGTG GTCATCTTGC CGAGTGGGGC GTGTTAAAAG GTGATGCAGA AGAGTTTGCT
GGCGTTCACT TCCCAGCAGA GCTGAATGAA TGTACTACCT GTCACGACAA TGGCAACCAG
TGGAAAGAAA ACGTTTACCG TGAAGCTTGT GTAGGTTGTC ACGTAACCGT TAACTTCGAA
ACCGGTGAAG GTCACTCTGA CTTCCAGCTA CCACAGGCTG ATGATTCTCA ATGTATGAAC
TGTCACATTG GTAACCTGAG CCCAGATGCT GTGCACAAAG TCGGAGCTAG AGCTATTGCG
ACGGACTCTA TGGAAATTAG CGTTAGCTCA GTGTCTTACA CAGAGAATGC TTCTCCTACG
GCAGATGAAA TTGTGGTGAC ATTTGATGTG ACTGTCGACG GTGCGCCTAT CGCGGATGGC
TTTGATTTTA CTGATTACAC TAAGTATGAC GTAATGCTGT TAGGTTGGGT TGATACTGAT
GGTACTTACC ATGGTAATGC CACTAAGACA ATGAACTTAA ATGGAGTACC AGCTGTTGGT
GGTAAGTTAG TGGTTACACT ACAAAAAGAC GGCCTAGACT TCGATGGTAA GAGCATTGCA
ATTACCCCAC GCTTCTCTGT ATGTGCTGAT GCTAAGGGTA TGCTAGCTAA ATGTGCTGAT
GCAGATATTG AATATGTAGG GGTCACCATG GCACCAGCAT ATTGGAATCT CGCTAATGCA
GATGGTAGTG GTGCAACTCC AGTTAGACAA AGTAATCCTG CTTCTATTAC GGCAGATGAA
GCTAAGTGTA GTACATGTCA TGGCTCGCTA ACTGTTGCTA AGCACTATGG TAATGAACGT
TTTGACCAAT GTGTTGGTTG TCACAACAAT ACTTGGGGTG GCTCTTACCA TGTGGCTGTT
GAGTATAAGA GTGATGAGGT TGATGCTGAC GGTAAGCCAA TATTCAAGAC GCTTGAAGGT
GTGACCTTCA GCAATAGAGA TCTTGTTACA GTGGCTCACC GTTTCCATAC AGGTCTTTGG
GATGACAACA GAGGTTTCCC TGGAATTCAC CTAGATTCTG ATTTGGAAGT GGTTGGATAC
CCAGCATTGG CAACCGATTG TCAGGCATGT CACAAAGATG GAGCGAAATT CTTCGCTGCT
GACGGTGGTT TGACTTCAGG TAAACGCGCT ATTGCAGTTG ACGCCGCAGG TACACAGTTT
ATTACCCCTG TTGCAGAGTC ATGTCGTTCT TGTCACTACA GTGCCTCTGC ACTCGCTCAC
TTCGAGAGCA ATGGTGCGAC TGTACATGGT AAGCCAGATA CAACTGCTGA CCTGCCAGTC
GAGTCTTGTG CAACCTGTCA CGCCGAAGGT AAGACATACG GTGTCGATAA AGTTCACGCC
GGTGGTGCTC ACTAG
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| Protein sequence | MKKNKITLLA MALFCAIGVS ACSDGEDGKD GAPGEPGVPG TPGTPGAPAG STVDTVATAA
DFKLTLQPAD IVVVGADDFS IKFTATGKNS KGDDVPFTGL EKVALYVTNQ VANTTSSGAP
MLWSNNALAN EFGSSMYCTP TGKAAARGGA EVDACTLVED AENPGTYTGT WEHDGNAPVV
VADGDPNSMF RVMIRTYDVT DATGVSISDK LLSTPLDFIP ATGEMAVSAK DSVSSAACIQ
CHSELMGYDD GDKRIANIGA HHNYQKVENC IACHNPAYAA DQNDPEKGFN PNFNAMIHTI
HAGGHLAEWG VLKGDAEEFA GVHFPAELNE CTTCHDNGNQ WKENVYREAC VGCHVTVNFE
TGEGHSDFQL PQADDSQCMN CHIGNLSPDA VHKVGARAIA TDSMEISVSS VSYTENASPT
ADEIVVTFDV TVDGAPIADG FDFTDYTKYD VMLLGWVDTD GTYHGNATKT MNLNGVPAVG
GKLVVTLQKD GLDFDGKSIA ITPRFSVCAD AKGMLAKCAD ADIEYVGVTM APAYWNLANA
DGSGATPVRQ SNPASITADE AKCSTCHGSL TVAKHYGNER FDQCVGCHNN TWGGSYHVAV
EYKSDEVDAD GKPIFKTLEG VTFSNRDLVT VAHRFHTGLW DDNRGFPGIH LDSDLEVVGY
PALATDCQAC HKDGAKFFAA DGGLTSGKRA IAVDAAGTQF ITPVAESCRS CHYSASALAH
FESNGATVHG KPDTTADLPV ESCATCHAEG KTYGVDKVHA GGAH
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