| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0896 |
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| Symbol | |
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| ID | 4923877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1016897 |
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| End bp | 1017610 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162428 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001093026 |
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| Protein GI | 127511829 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000189871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.423328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAT CTCAATCGAC CCATAGAGTC TTGCTCGTCG AAGACGATAT TCGTCTGGCA
AACCTGATTG TGGATTATTT AAAGTCGCAT GGAATGCACG TGGAAGTTGA GCGTCGCGGT
GATACCGTAC TGACCCGACT GATCAACTAC AAACCAGATA TCATCTTGCT CGATATCATG
CTGCCAGGGA TGGATGGCCT TACCCTCTGT GAAAAACTGC CCGACTACTT CGCCGGTCCT
ATCCTGCTGA TGAGCGCCCT GGGTTCCAAC GAAGATCAGA TCAAGGGGCT GGAGCTGGGC
GCCGACGATT ATGTGGTCAA GCCAGTAGAT CCTGCGCTGC TTATCGCCCG CATCAATAAT
CTGCTGCGAC GCACCGCCAA GCCGCCACAG GCGGAGTCTC ACTGCCTGAG CTTCGGCAAG
CTAAGCATAG ATCCGCACAC TCAGGCGATT CGCCTTGGCG ATCTCGAGGT GGATCTCACC
AGCCATGAGT TTGAACTCCT CTGGCTGCTG GCCTCACAGG CGGGCCAGGT ACTGAGCCGC
CAATATATCT ATCAATACCT GCTCAACATC GATTTCGACG GTAAGGACAG GAAGATCGAC
GTGCGTATCT CACGGCTACG TAAGAAGTTA GGTGACAATA TCGAAACCCC ATTTAGAATT
AAGACGGTAT GGGGTCAGGG ATATCTGTTC GCCCCAGAAG CCTGGAACAA CTAA
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| Protein sequence | MTESQSTHRV LLVEDDIRLA NLIVDYLKSH GMHVEVERRG DTVLTRLINY KPDIILLDIM
LPGMDGLTLC EKLPDYFAGP ILLMSALGSN EDQIKGLELG ADDYVVKPVD PALLIARINN
LLRRTAKPPQ AESHCLSFGK LSIDPHTQAI RLGDLEVDLT SHEFELLWLL ASQAGQVLSR
QYIYQYLLNI DFDGKDRKID VRISRLRKKL GDNIETPFRI KTVWGQGYLF APEAWNN
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