| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0891 |
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| Symbol | |
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| ID | 4921624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1011415 |
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| End bp | 1012728 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162423 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001093021 |
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| Protein GI | 127511824 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.984742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGTT TTAATCGAAG AAAAGCGCTA GTCCCACAGG ACGAGGATTA TCAGGCCCTG
TGTGACGATA GTCAGATGCT TAGGGCGATT CGTCAGAGCG CGCCTTTTAT CGAGTTCACC
ATAGAGGGGA AAATATTATC TGCCAATCAG CAATTTCTCT CCGCCATCGG CTATAGACTC
GAGGAGATAC AGGGCCAGCA CCATAGGCTG CTCTGCAGCC CGTCACTAGC CAGCAGCGCC
GCCTATCGCA CCTTCTGGCA AAACCTCGCC ATGGGCGAGG CCAATCACGG CACCTTTCAG
CGCCAACACA AGGATGGCTC ACCAATCTGG ATCGAGGCCA CCTATGTGCC GGTTGCCGAC
GACACGGGGC GCATCACTAA GGTGGTCAAG ATCGCCAGCG ACGTTACCCA GGAGAAACAG
CAGGCAGAGC GGCAAGAAGC TATATTCGAT GCCTTAAATA AGTCTCTGGC TTATATCGAG
TTTACCCCGC AAGGGGAGAT CATCGACGCC AACGCCAACT TTTGTAGCGC CATGGGCTAC
TCCCTCGAGC AATTAAAGGG GCAACACCAC CGCCTCTTCT GCACCGAGGC CTTCATGCGC
CAGCACCCCG ACTTCTGGGC CGATCTCGCC AAGGGGCGTT TTCAGTCTGG CCTGTTTGAG
CGCGTCACCA GACATGGGCA AGCCATCTGG TTAGAAGCCA CCTATAACCC GGTATTCGAT
GATGCAGGAC GGGTCGTACG GGTGGTTAAA CTGGCCAGCG ACATCACCCC GCGCATCATG
CATCAACAAG CGGTACAGGA GGCGTCACAA CTCGCGCACC AAAGCGCCGT AGAAACCGTA
GAGATCACCG GCCAGGGGGC AAGCACCCTG AGCACCGCCA CCAGCCTGGC CAATGAGATC
GATGGTGCGG TAGCCGATGC CACAAGGCTA ATGGGCGAAC TGGCGCAGCA GTCACAGCAG
ATCAGCCAGA TAGTGCACAC CATCGCCAAG GTAGCGGATC AGACTAACCT GCTGGCGCTC
AACGCCGCCA TCGAGGCCGC CCGCGCCGGC GAACAGGGAC GCGGTTTCGC CGTAGTCGCC
GACGAGGTGC GCAACCTCGC CGCCAACACC TCCAATGCCA CCCAGGATAT CGAGCGCATC
GTCGCCCGCA ACAGCGAGCT GACCCAAGTG TCTGAGCAGG GGATGCAATC GATTCAGCAG
AAGGTCTCCC TCTCCAATCA ACAGCTGGCG GCCACCCAGG CGTTGATCGA CGAGATCCGC
CGCGGGGCGC AGCAGGTAGC AGATACGGTC AATGGCCTGG TCAGCAAAGA CTGA
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| Protein sequence | MFGFNRRKAL VPQDEDYQAL CDDSQMLRAI RQSAPFIEFT IEGKILSANQ QFLSAIGYRL
EEIQGQHHRL LCSPSLASSA AYRTFWQNLA MGEANHGTFQ RQHKDGSPIW IEATYVPVAD
DTGRITKVVK IASDVTQEKQ QAERQEAIFD ALNKSLAYIE FTPQGEIIDA NANFCSAMGY
SLEQLKGQHH RLFCTEAFMR QHPDFWADLA KGRFQSGLFE RVTRHGQAIW LEATYNPVFD
DAGRVVRVVK LASDITPRIM HQQAVQEASQ LAHQSAVETV EITGQGASTL STATSLANEI
DGAVADATRL MGELAQQSQQ ISQIVHTIAK VADQTNLLAL NAAIEAARAG EQGRGFAVVA
DEVRNLAANT SNATQDIERI VARNSELTQV SEQGMQSIQQ KVSLSNQQLA ATQALIDEIR
RGAQQVADTV NGLVSKD
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