Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0883 |
Symbol | |
ID | 4920873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1004025 |
End bp | 1005062 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640162416 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_001093014 |
Protein GI | 127511817 |
COG category | [R] General function prediction only |
COG ID | [COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000858674 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCTTGT CAGATCCAAG ATTTCTTGCC CTTAATTCAT GGATAGCGCG AACTTTAGGC GATGAGGCGC GAGTCGCCTT AATTTCCGGT GACGCCAGTT TTCGCCGCTA CTACCGTGTC CAGTTTTCAA ACCAGACGTT TATCGCCATG GACTCGCCGC CGGATCTGGT GCCCGTCGCC CCTTTTATCG CCCTCGCAAA CGCCTATCAC GACCATGGCA TACTGGCGCC AGAGGTTAAG GCCGCCGATC TGTCTCAAGG CTTTCTGCTG CTCTCGGATC TCGGCGATAC CCAGCTGCTG GAGGTGCTGA CCTTAGACAA TGTCGGACAA TATTATGGCA AGGCTCTTGG ATTGCTTGAT AAGCTACAGA CCATTACTTC GGCGGCGGGG CAGCCCTTGC CCGATTATGA TGACGCCTTC GTGCTGCGTG AGCTGAATAT TTTCGTCGAG TGGCTGCTCG AACATCATCT TAAGCTGAGC CTCGACAGCC AGACCCGGCA GATAATCGAT AAATGTTTCC ACCTGCTTAT CGATAACGTC GCCGAGCAGC CCAAGGTAGG CATGCACAGG GACTACCACA GCCGCAATCT CATGCTATGT GATGGCGAGC TGGCGGTGAT CGATTTTCAA GATGCTGTCT TAGGTCCCAT CACCTATGAC GCCGTCTCCT TGCTGCGCGA CTGCTATGTG CGCTGGCCGC TCGACGTGGT CGAGCCTCTG CTCAATCGGC ACTATCAGCA GATGCGCGCC CTGGGCCGCC TGGGCGATGA GGTGAACTTG AGCCAGTATC GCCGCTGGTT CGATCTCATG GGGATGCAGC GCCACCTCAA GGCGGCGGGG ATCTTCTGCC GTCTCAACTA TCGTGACGCC AAGCCGGGCT ACCTTAAAGA TATTCCCCTG ACCCTGAATT ATGTATGTGA CATAGGGGCG CAATATCCTG AGTTTGCCGA GTTTGTTGCC TGGTTAAGGC GTGAGGTGAT GCCGCAGATG ACGAGCGACA AGTTGTCGCA GCTGACAAAT GAAACGGAGG CGCTGTGA
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Protein sequence | MPLSDPRFLA LNSWIARTLG DEARVALISG DASFRRYYRV QFSNQTFIAM DSPPDLVPVA PFIALANAYH DHGILAPEVK AADLSQGFLL LSDLGDTQLL EVLTLDNVGQ YYGKALGLLD KLQTITSAAG QPLPDYDDAF VLRELNIFVE WLLEHHLKLS LDSQTRQIID KCFHLLIDNV AEQPKVGMHR DYHSRNLMLC DGELAVIDFQ DAVLGPITYD AVSLLRDCYV RWPLDVVEPL LNRHYQQMRA LGRLGDEVNL SQYRRWFDLM GMQRHLKAAG IFCRLNYRDA KPGYLKDIPL TLNYVCDIGA QYPEFAEFVA WLRREVMPQM TSDKLSQLTN ETEAL
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