Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0881 |
Symbol | |
ID | 4920578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1000116 |
End bp | 1001420 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640162414 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001093012 |
Protein GI | 127511815 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000301767 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.688163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCT GTAAACAACT GATTTTTGCT TTACTTACAC TGGCGATGAG CCACGGCGCG ATGGCCGAGA ACGTACCCCT GGATAGGGTG ACGGTTCAGA TCAACGAAGG CATAGTGCTG GAAAGCGAAA TCGTCAACAT GTTGAAGACA GTCAAAGCCA ACGCAAAAGC CGCCGGCCAG TCATTACCTT CTGACAAGGC GCTGCGCACT CAGGTGATCG AGCGTCTGAT CGTGACCCGT CTGCAACTGC AAATGGCCGA CCGCATCGGC CTGCATATCG GTGACCTGCA ACTGGACCAG ACAATCGAGA ACATCGCCAA AGAGCAGAAG ATGACTCCTG AGATGATGCG CGAAAAGGTC GAGGCCGAAG GCATGAGCTG GAGCCAGTAC CGCGAGCAAC TGCGCGAAGA GATCACCTTG GGCGAGATCC AGCGTATTCA GGTACAGCGT CGTATCCAGG TCTCTCCACA GGAGATCAAC AGCCTGGTTA AGCTAATCGA AGAGCAAGGG ATGCAGCAGG TGGAGTACCA GATCGGTCAT ATCCTGATCG AGGTGCCCAA CAGCCCTAAC AGCGAACAAC TTGAAGCCGC CAGCAGCCGT GCCAATGCCG TGCTCAAGCG CCTACAAGAC AATGCCGACT TCAAACAGAC CGCCATCGCC TCCTCTTCTG GCCCTAAGGC GCTGGAAGGC GGTATCTGGG ATTACATGAA CGTCAATGAG ATGCCAACCC TGTTCGCCGA GCTTTTAGTC GGTGCCAAGA CGGGTGACAT CATAGGCCCT GTGCGCAGCG GCGCCGGTTT CCACATCATC AAGGTGATGG ATGCCCGCGG CCTGCAGACC AAAGAAATTG ACGAAGTACG TTCACGTCAT ATACTGATCA AGCCGTCGCC TATCCTGTCG GAAGAGCGCG CCAAGGCGAT GCTAGACAAG TTTGCGGCCC AGCTAAGACG CGGCGAAGCC GACTTTGCCA CCCTGGCCCG TCAATACAGC GAAGACCCAG GTTCGGCGGC CAAGGGCGGC GAACTGGGCT GGGCAGATCC TACCGTCTAC GTACCTGCCT TCGCACAAAC ATTGGGCGCA CTGAAGATCA ACGAGATCAG TGAGCCATTC CGTTCTAGCC ACGGCTGGCA CATAGTGCAG CTGGAGGAGA GACGTAAGAC GGATGCGACA GATAAATTTA ACACTAATCG GGCGCACCAG CTCATCTTCC GCCGCAAGTT TAATGAAGAA TTACAAAACT GGCTGGATGA AATGCGAGCA GAGGCTTACA TTGAAGTATT CGATGCCGAT TTCAATCGAG GTTAA
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Protein sequence | MKPCKQLIFA LLTLAMSHGA MAENVPLDRV TVQINEGIVL ESEIVNMLKT VKANAKAAGQ SLPSDKALRT QVIERLIVTR LQLQMADRIG LHIGDLQLDQ TIENIAKEQK MTPEMMREKV EAEGMSWSQY REQLREEITL GEIQRIQVQR RIQVSPQEIN SLVKLIEEQG MQQVEYQIGH ILIEVPNSPN SEQLEAASSR ANAVLKRLQD NADFKQTAIA SSSGPKALEG GIWDYMNVNE MPTLFAELLV GAKTGDIIGP VRSGAGFHII KVMDARGLQT KEIDEVRSRH ILIKPSPILS EERAKAMLDK FAAQLRRGEA DFATLARQYS EDPGSAAKGG ELGWADPTVY VPAFAQTLGA LKINEISEPF RSSHGWHIVQ LEERRKTDAT DKFNTNRAHQ LIFRRKFNEE LQNWLDEMRA EAYIEVFDAD FNRG
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