Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0873 |
Symbol | |
ID | 4923693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 993312 |
End bp | 993782 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640162406 |
Product | hypothetical protein |
Protein accession | YP_001093004 |
Protein GI | 127511807 |
COG category | [S] Function unknown |
COG ID | [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0929072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAGC TGCTGCTCAA GCTGCTAAAC GATGCGGCCT TCTCGGCTGT TCCTGCGGTG GGTTTCGCCA TGGTGTTCAA TGTGCCCAAA CGCTTCCTGC CATACTGCGC CCTGGCTGGC GCCCTGGGCC ACAGCCTGCG CACCTTGCTG CTGCATTTCG GTATGCCGAT AGAGTGGTGT ACCTTCGCCG CGGCGGCCTT GGTCGGGGTG TTAACCATAG GCTTTGCCAA GAAACATCTG GCACCGCCGC TGATGTACGC TGTGGCGGCG ATCATCCCAA TGATCCCGGG AACCTATGCC TACAACACAG TGATTGCCTT GGTGCAGCTG TCTGCCCAGT CTGAGGTGAG CCCAGAGCTG ACCGCCGAGG TGATAAGCAA TGGCTTGAAG ACCATCTTCA TCTTAGGGGC GTTATCTGTC GGACTCGCCA TGCCCAGTCT GCTCTATTTT CGTACCCGCC CAGTGATCTA A
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Protein sequence | MMELLLKLLN DAAFSAVPAV GFAMVFNVPK RFLPYCALAG ALGHSLRTLL LHFGMPIEWC TFAAAALVGV LTIGFAKKHL APPLMYAVAA IIPMIPGTYA YNTVIALVQL SAQSEVSPEL TAEVISNGLK TIFILGALSV GLAMPSLLYF RTRPVI
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