| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0869 |
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| Symbol | rplU |
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| ID | 4920562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 990557 |
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| End bp | 990868 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640162402 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001093000 |
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| Protein GI | 127511803 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000245664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACGCTG TTTTTCAAAG TGGTGGTAAG CAACACCGTG TTGCTGAAGG CCATACTGTA
CGTCTAGAAA AATTAGAAGT TGCTACAGGT GAAACTATCG AATTCGACCA AGTTCTTTTG
GTTGCAGATG GTGAAACTGT ACACGTTGGT GCACCTTTAG TTGAAGGTGG TAAGGTTGTA
GCTGAAGTGA TCAGCCATGG CCGTGGCGAG AAGGTAACTA TCGTTAAGTT CCGTCGTCGT
AAGCACCACG ATAAGAAGAT GGGCCACCGT CAGTGGTTCA CCGAAGTTAA AATTACAGCT
ATCAACGCTT AA
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| Protein sequence | MYAVFQSGGK QHRVAEGHTV RLEKLEVATG ETIEFDQVLL VADGETVHVG APLVEGGKVV
AEVISHGRGE KVTIVKFRRR KHHDKKMGHR QWFTEVKITA INA
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