| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0830 |
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| Symbol | |
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| ID | 4920609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 952139 |
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| End bp | 952828 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640162363 |
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| Product | LrgB family protein |
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| Protein accession | YP_001092961 |
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| Protein GI | 127511764 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGT CGCTGCTTGG CCTTGCTTGT TTGCTGGCGA CCCTGGTCAG CTATGGCCTG
AGTAAGCGTC TCTATCGCCG CTACGGTCAC TGGTGGCTGT CGCCCATGGT GCTGACGCCG
GGCTTCTTGC TAGCCTTGGT GGTGGGGTTT GCCATTCCGC TGCCCACCTA CTTCGAGTAC
AACCACTACC TCAGTTTATT GCTGGCACCG GCGACCATCG CCTTCGCCCT GCCTATCTAC
CGCGAGCGCC ATCTTATCCG CCGCTATCCG CTGACCCTGA GTCTGGGTGT GTTGACCGGC
CTGTTGGCGG GCTTGGTCTC CTCCTGGCTG CTGACTAGGG TTATCTATCT GCCGCCCGAG
CTGTCCCACA GCTTGCTGGT GCGTTCGGTC TCGACCCCCT TTGCCCTGGA GGCGACCCGC
GAATTTGGCG GCGTGCCGGA TCTCACCGCC GTACTGGTGT TGATGACGGG GGTGCTGGGC
ATGTTGCTGT GTGGTCCTGT GTTCAGGCTG GCGAAGATCT CTAGCCCTTT GGCTAAGGGC
GCCGCCTTAG GCGCCAGTGC CCACGGGGTG GGGGCGGCCA AGGCCGCCGA ATATGGCCGG
GAGGAGGGCG TGGTGGCTAG CCTCACCATG ATCTTTACCG GCATCGCCAT GGTGGTCGGT
GCGCCGCTAT TCGCCTATCT GCTGGTCTAG
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| Protein sequence | MHLSLLGLAC LLATLVSYGL SKRLYRRYGH WWLSPMVLTP GFLLALVVGF AIPLPTYFEY
NHYLSLLLAP ATIAFALPIY RERHLIRRYP LTLSLGVLTG LLAGLVSSWL LTRVIYLPPE
LSHSLLVRSV STPFALEATR EFGGVPDLTA VLVLMTGVLG MLLCGPVFRL AKISSPLAKG
AALGASAHGV GAAKAAEYGR EEGVVASLTM IFTGIAMVVG APLFAYLLV
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