| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0828 |
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| Symbol | |
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| ID | 4920577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 950712 |
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| End bp | 951605 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162361 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001092959 |
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| Protein GI | 127511762 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTA AGGCACTACA CTACTTCGTC GAGATCGTCG CCTCGGGAGG CTTTAACCGC
GCCGCCGAGC GGATCCATAT CAGCCAGCCC GCCCTCTCCA AGTCTATCGC CCAGCTGGAG
ACCGAGCTGG CATTGCCCCT GCTCACCCGC GGCAAACGCG GCACTAAGGT GCAGCTCACT
CCCCATGGCG AGGTGGTCTA CCGCCACGCC CTCAGGCTTT TGGAAGATAA GCAGACGATG
ATGGAGGAGC TGGCACAACT GAAGGGCCTC AATCGCGGCA TACTAAAACT GGGGCTGGCG
CCGCTGGGCA GCGCCGAGCT GTTTGCCCCC ATCATCGCCA AGTATCGCCA GGCTTACCCT
GAGATAGAGA CCCAGCTGCT GGTTCGCGGC GGCGTCGAGC AGACCCAGGC ACTGCAACAG
GGTGAAATTG AACTCGCCAC CGGCATTATC GATCTCAAGG ATCGCTATGA GGGGATCGCC
ATCCATACCG AGCCCATGGT GGTGGTACTC CCCAGCGAGC ATCCGCTAGC CAGGCGCTCA
GAGATCCCCC TTGGCGAGCT CGATGGCCAG GCGCAGATCC TGTTTGAGTC TGAGTTTTCT
CTGCATGAGA TGGTGATCAA TGCCTGCCTG CATGCTGGTG TGAGCATCAA GAACCCCACC
CAGGTGAATC AGCCGGAATT TGGCGTCGCC CTGGTGGCCG CCGGGATCGG CCTGATGCTG
CTGCCTAAAT TTATTGCCGA GCGCTACCGC CCAGACGCCG TTATCACCCG CCCCCTGACC
CAGACGGATC TCAGCTGGCA GATGAGCCTG TTTTGGCGTA AAGATCTCAG CCTCTCCTTC
GCCGCCCAGG CAATGATAGA TCTGGTCAAA CATCATCAGG CAAGCGGCGC TTAG
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| Protein sequence | MDLKALHYFV EIVASGGFNR AAERIHISQP ALSKSIAQLE TELALPLLTR GKRGTKVQLT
PHGEVVYRHA LRLLEDKQTM MEELAQLKGL NRGILKLGLA PLGSAELFAP IIAKYRQAYP
EIETQLLVRG GVEQTQALQQ GEIELATGII DLKDRYEGIA IHTEPMVVVL PSEHPLARRS
EIPLGELDGQ AQILFESEFS LHEMVINACL HAGVSIKNPT QVNQPEFGVA LVAAGIGLML
LPKFIAERYR PDAVITRPLT QTDLSWQMSL FWRKDLSLSF AAQAMIDLVK HHQASGA
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