| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0823 |
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| Symbol | |
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| ID | 4921435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 946201 |
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| End bp | 947106 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162356 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001092954 |
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| Protein GI | 127511757 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA TCAGCGCGAT CCGTAGCTTC GTCGAGGTGG CCAGTTGCGG CAGCTTTACC
CAAGCCGCCG AACAACTAGG CCTCAGCCGA CTACAGGTCT CCCGCCATAT TCAGGAGGTG
GAACGTTGGC TGGGACTGCG CCTGCTGCAT CGCACCACCC GCAGCGTTAG CCTGAGCGTG
CAGGGCGAGG AGGCCTTCAT CTATTGTCAG AAGATCCTCG ATGAGGTCGC GGCGCTGCAA
AACCGCGCCC AGCGTCATAG GCAGGAGCTG GTCGGCAGCA TACGTATCGC CTCCCCCATC
GGCCTGGGTC AGGCGCTGCT GTTCGATGCG GTCGATGACT TCACCCGCGA GCATCCCGAA
GTCAAGGTGC AGCTGCAGCT GTCGGATGAG ATGGTGCAGC TGGTCGATGA GCGGGTTGAT
ATCGCCCTGC GTTACACCCA GCAGCCCGAT GAGAGCCTGA TCGCCCGTCG CCTGATGCAT
ATAGACTCAG TGCTGTGCGC CTCGCCTGAC TATCTCGCTG GCCATGAGCC CATCACCAGC
CTCGACGATA TCACGGCGCA CAACTGCCTG CTGCACGCCA GCCAAACCCG CTGGTTGTTT
GTCAAAGACA ATCAAAATAT TGAAAAAAAG ATCAGCGGTA ACCTACAGGC CAACGACATG
GGCGTGCTCA TCAAGGCGGC AATGCGGGGC AAGGGGCTCA TTCACCTGCC CTGCGATCTC
GCCAATGCCC ATCTGGCCTC TGGAGAGTTG GTCGAGCTGC TGCCTGAATA TCACCTGCCG
GGCAAGACGC TGTGGGCCGT CTACCTGTCG CGCAGCTATC AGCAACATCT GATTCGCCAC
TTCATCGATT TTCTCGCCGA GCGCTGGCAG CAAGATATCC TCAAGCAGCC CGCACCGGCC
CGATAG
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| Protein sequence | MDKISAIRSF VEVASCGSFT QAAEQLGLSR LQVSRHIQEV ERWLGLRLLH RTTRSVSLSV
QGEEAFIYCQ KILDEVAALQ NRAQRHRQEL VGSIRIASPI GLGQALLFDA VDDFTREHPE
VKVQLQLSDE MVQLVDERVD IALRYTQQPD ESLIARRLMH IDSVLCASPD YLAGHEPITS
LDDITAHNCL LHASQTRWLF VKDNQNIEKK ISGNLQANDM GVLIKAAMRG KGLIHLPCDL
ANAHLASGEL VELLPEYHLP GKTLWAVYLS RSYQQHLIRH FIDFLAERWQ QDILKQPAPA
R
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