| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0805 |
|---|
| Symbol | |
|---|
| ID | 4920776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 917999 |
|---|
| End bp | 918394 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640162338 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001092936 |
|---|
| Protein GI | 127511739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00341029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCTA ATGCCATCAA GCTGATACAG TGCATGTTAC TGCTGGCGCT GGCCACCAGC
TTCTACTGCC AGGCCAATAG CACTCAGGTC AATATTAAGC CCAAGACCTG CGCGGTTCTC
GAGGCCGGCA CGCCCTGTCA CATGACGCTC AAGATCAGCT ATAAACTCGA GGCACTGGAG
CAGACCTGTA TCTGGATAGC CCTCAAGGAG GCCCCGGAGC AGTGTTTCGA CCGGATGAGC
GTGGATCACC TGCTGGAGCT GACGCTCACC AAGGATACCC AGGTGCTGAT CAAAGATCTC
AACAACAAGG TGCTCGATGA GGTGACCATA CAGATCGCCA CCTATCAGCC CGTAAACACC
CGCAAGCGAC GAGGACTCAA CTGGAACCTG TTATGA
|
|---|
| Protein sequence | MPSNAIKLIQ CMLLLALATS FYCQANSTQV NIKPKTCAVL EAGTPCHMTL KISYKLEALE
QTCIWIALKE APEQCFDRMS VDHLLELTLT KDTQVLIKDL NNKVLDEVTI QIATYQPVNT
RKRRGLNWNL L
|
|---|
| |