| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0804 |
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| Symbol | |
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| ID | 4924028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 917298 |
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| End bp | 918002 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162337 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001092935 |
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| Protein GI | 127511738 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0162077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC CTAAGATTCT CCTGATTGAA GACGATCTGG ATTTGGCGGA GCTCACCCTG
CTCTACCTGA CACAGCAAGG CTTCGACCTG ACCCACAGCG AATCGGCCCA GGCGGTGGCT
AATTTGCCCG CAGATCTAAG GTTCGATCTC ATCATCTGCG ACATCATGCT GCCCGACAGC
GATGGCTTTA GCCTGTTTGC CGAGCTACAG GCGCGCTACC AGTGTGTGAT CATCTTCATG
ACCGCCCTCG ACGGCCAGCA GGAACAGATA AAGGGCTTAG AGCTGGGCGC CAGCGACTAT
ATCGTCAAGC CGGTCAACCC CGAACTCTTA GTGGCTCGCA TCAAGGCCAA CCTGAGAAAG
CTCCCCAGCG AGGCGCCGCC CCAAAGTGTC ACCCTGCACG ACTTCACCAT AGATCATACC
CACCAACAGC TGACCATAGG CGACCGACAA CAGAAGGTGA CCACCCAGGA GTTTGACCTG
CTATGGATCT TCGCCCAGCA TCCGGGCAAG GTGCTCAGCC GCGAATACCT GTTCGAGCAG
TATGTGGGCC GTCCTTACGA TGGCCTGGAC CGGGCGATCG ATCTTAAGAT CAGCCGCCTG
AGAAAGAAGA TAGACAGCTA TCAGATAGAC GGCCTGACCA TCAAGACGGT GCATGGCCAG
GGCTATCTGT TTAACTATCA GCCCCAGCTC TCGGACAAGG GATGA
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| Protein sequence | MSKPKILLIE DDLDLAELTL LYLTQQGFDL THSESAQAVA NLPADLRFDL IICDIMLPDS
DGFSLFAELQ ARYQCVIIFM TALDGQQEQI KGLELGASDY IVKPVNPELL VARIKANLRK
LPSEAPPQSV TLHDFTIDHT HQQLTIGDRQ QKVTTQEFDL LWIFAQHPGK VLSREYLFEQ
YVGRPYDGLD RAIDLKISRL RKKIDSYQID GLTIKTVHGQ GYLFNYQPQL SDKG
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