| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0777 |
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| Symbol | |
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| ID | 4920765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 888003 |
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| End bp | 888722 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640162310 |
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| Product | two-component response regulator |
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| Protein accession | YP_001092908 |
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| Protein GI | 127511711 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000399592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000157294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAAACC CGCACATTCT GATCGTTGAA GATGAAGCCG TTACCCGGAA CACGCTAAGA
AGTATTTTCG AGGCTGAAGG ATATGTGGTA ACTGAAGCCA ATGACGGCGC AGAGATGCAT
AAAGCCATGC AGGAAAACAA GATCAATCTT GTGGTTATGG ATATCAACCT ACCAGGTAAG
AATGGTCTGC TGCTTGCGCG TGAACTTCGT GAAATCAATA ACATCGGCCT TATCTTCCTT
ACCGGCCGTG ACAACGAAGT TGACAAGATC TTGGGTCTGG AAATTGGTGC CGATGACTAT
ATCACCAAGC CATTTAACCC ACGCGAACTG ACTATCCGTG CACGCAACCT GCTGACTCGC
GTCAACAGCA CTGGCGGCGA AACCGAAGAA AAGAGTGCCG TAGAATTCTA CCGCTTCAAC
GGTTGGAGCC TAGAGATCAA CAGCCGTTCA CTGGTAAGCC CACAAGGCGA GTCGTACAAG
CTGCCCCGCA GTGAGTTCCG CGCCATGCTG CACTTCGTTG AGAACCCAGG CAAGATCCTG
ACCCGTGCCG ACCTGCTGAT GAAGATGACA GGCCGTGAGC TTAAGCCACA CGACCGTACC
GTGGACGTGA CCATTCGTCG CATCCGTAAG CACTTCGAAA GCTTGCCAGA TACGCCAGAA
ATCATCGCCA CCATCCACGG CGAAGGCTAT CGTTTCTGCG GTAACTTAGA AGAAGCATAA
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| Protein sequence | MQNPHILIVE DEAVTRNTLR SIFEAEGYVV TEANDGAEMH KAMQENKINL VVMDINLPGK
NGLLLARELR EINNIGLIFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLTR
VNSTGGETEE KSAVEFYRFN GWSLEINSRS LVSPQGESYK LPRSEFRAML HFVENPGKIL
TRADLLMKMT GRELKPHDRT VDVTIRRIRK HFESLPDTPE IIATIHGEGY RFCGNLEEA
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