Gene Shew_0773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0773 
Symbol 
ID4920597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp882949 
End bp883938 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content57% 
IMG OID640162306 
Productfructose-1,6-bisphosphatase 
Protein accessionYP_001092904 
Protein GI127511707 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0158] Fructose-1,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000138522 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0106002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTC TGGCACAACA CCTTAGTTCA CAAGGAATTC AAGCCCCGCT GGCCCAGCTA 
TTAACCACGC TGGCCGATAC CTCTAAAGCC ATCAGTCACG CGGTGCGTCA CGGCGCCCTC
GCTGGCGTAC TGGGTGCCAC CGAACAGGAA AACGTTCAGG GCGAAACCCA GAAGAAGCTC
GACGTGATCA CCAATGACAT GCTTAAAGAG GCGCTCACGG CCGACAGCAC GGTACGTGGT
CTGGCATCTG AAGAGGAAGA TCATATCGTC GAGGTAGGCC AGAGCGGCGA CTTCCTGGTC
TGTTTCGACC CACTGGATGG CTCGTCAAAC ATCGACATAA ACTCTCTGGT CGGTACCATC
TTCTCGGTAC TACCGGCTCC GAGCGGAGAG CTGAGCGAGC AGAGCTTCCT ACAGCCCGGC
CGTCAACAGG TCGCCGCCGG TTACGTGCTA TATGGTCCTT CGACCATGCT GGCCCTCACC
ACAGGCCAAG GGGTGCAGCT GTTTACCCTC AACCCAGAGA CCAACGAGTA CCTGCTGACC
AACGAAGCCA TGTCCATCAG CAAGGACACC AGCGAGTTCG CCATCAATAT GTCTAACCAG
CGTTTCTGGG AAGCACCGAT GCAGACCTAT ATCGCCGACC TGCTACTTGG CAAGATAGGG
CCGCGCGAGA AGTCGTTTAA CATGCGCTGG ATCGCGGCCA TGGTTGGCGA CGTGCACCGT
GTACTGTCAC GCGGCGGACT GTTCACCTAC CCAACCGACA ACAAGAATCC AGAGAAGCCA
TACAAGCTAC GCCTAATGTA CGAAGCTAAC CCTATGTCTT TCCTGGTTGA GCAGGCGGGC
GGCAAGGCCT CTACCGGCTA TGAAACCATC ATGGACATCC TGCCAAGCGA GATCCACCAG
CGCGTCGCTG TGATCTTAGG CTCGGCCAAC GAAGTCGATG CCTGCCTGGA ATACCATGGT
CAGGACTACA GCGAAGAGCC AAGCCTGTAA
 
Protein sequence
MQTLAQHLSS QGIQAPLAQL LTTLADTSKA ISHAVRHGAL AGVLGATEQE NVQGETQKKL 
DVITNDMLKE ALTADSTVRG LASEEEDHIV EVGQSGDFLV CFDPLDGSSN IDINSLVGTI
FSVLPAPSGE LSEQSFLQPG RQQVAAGYVL YGPSTMLALT TGQGVQLFTL NPETNEYLLT
NEAMSISKDT SEFAINMSNQ RFWEAPMQTY IADLLLGKIG PREKSFNMRW IAAMVGDVHR
VLSRGGLFTY PTDNKNPEKP YKLRLMYEAN PMSFLVEQAG GKASTGYETI MDILPSEIHQ
RVAVILGSAN EVDACLEYHG QDYSEEPSL