| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0771 |
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| Symbol | |
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| ID | 4920806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 880241 |
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| End bp | 880966 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162304 |
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| Product | thiol:disulfide interchange protein DsbC |
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| Protein accession | YP_001092902 |
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| Protein GI | 127511705 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1651] Protein-disulfide isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0298623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTTTA CCCGAGCGCT CACCTTAGTT GTTGCCATGG TGGCCACGCC TCTAATGGCG
GCATCAAACA ACGTGGTCGA CAATGGCGAC CAGTTGAAGC AGAAATTATC AGATACCCTA
GGCGTCGAGG TGCAAAACCT TAGCCAGTCG CCAATCCCAG GCCTGTATGA GGCGATCACC
AACCGTGGCG TGCTCTACAT CAGCAAAGAC GGCAGCAAGC TGTTTCACGG TAACCTGTAC
GATCTCGACA ACGGCATGAA GAACCTCACC GAGGCGGCAT TAGCCGGTCC GCGTATGGAA
GCGATCAAGC CGTTTGAGCC AAACATGCTG GTCTACAAGG CCAAGGATGA GAAGCATGTG
GTGACCGTAT TTACCGACAT CACCTGTGGC TACTGCCGCA AGTTACACAA TCAGATGGCC
GAGTATAACG ACTTAGGCAT CACGGTACGT TATCTGGCCT TCCCTCGTCA GGGCGTGCCG
TCTAAAAACG CAGTGGATAT GGAAGCCGTA TGGTGCTCGG CCGATCCGCT CAAGGCAATG
ACAGATGCCA AGGCGGGTAA GCAGGTTTCG GGGGCTAAGT GTGATGCTAA GATCGCTCAG
CAGTATCAAC TTGGGCAGAG TCTTGGGGTG AACGGCACGC CAGCCATTAT CTTGGAAGAC
GGTACCATGA TCCCGGGTTA TCAGCCGCCT GAGCAGCTAC TCCAGGTGCT GGACCGCGTC
CAATAA
|
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| Protein sequence | MKFTRALTLV VAMVATPLMA ASNNVVDNGD QLKQKLSDTL GVEVQNLSQS PIPGLYEAIT
NRGVLYISKD GSKLFHGNLY DLDNGMKNLT EAALAGPRME AIKPFEPNML VYKAKDEKHV
VTVFTDITCG YCRKLHNQMA EYNDLGITVR YLAFPRQGVP SKNAVDMEAV WCSADPLKAM
TDAKAGKQVS GAKCDAKIAQ QYQLGQSLGV NGTPAIILED GTMIPGYQPP EQLLQVLDRV
Q
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