| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0743 |
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| Symbol | |
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| ID | 4920572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 844566 |
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| End bp | 845867 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162276 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001092874 |
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| Protein GI | 127511677 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTC AACAAACCTC TTCTTGGCTG GGCCGAGCCT GGTCTGGCTG GATGTCTGTG
CCCCTGTGGC TACAAATCCT TATTGGTATG CTGCTGGGTA TCTGCGCCGG CCTGGGCCTG
GGCGAACAGG CGGTGCTGCT TAAGCCAATA GGTACGCTTT TTGTCAACAC CATCAAGATG
TTGATTGTCC CCTTGGTGTT CTGTTCCCTG ATCGTGGGGG TAACTTCGAT GCAGGATACC
GCCAAGATGG GCCGCATCGG TTTTAAATCT TTCGCCTTCT ATCTGGGCAC TACCTCAATC
GCCATCACGC TCGGTTTGGC CGTGGGTCAT ATCATGCAAC CCGGCGCCGG ACTGGCGATG
ACCTCGGCTG AGAGTCACAA CGCGGTGAAA GAGGTGCCTT CTATCATGGA GACACTGATC
AACATAGTGC CAACCAATCC TATCGCGGCG CTAGCGAGCG GGCAGATCCT GCAGGTGATC
GTGTTCGCGG TGGCTCTGGG TATTGCCCTG GTGTTGATTG GCGACCATGG TAAGCCGGCC
ATCAAGGTGT TCGAGAGCCT GGCCGAGGCC ATGTATAAGC TGACCGACAT GGTGATGAAG
CTGGCGCCAT ATGGTGTGTT TGGCCTGATG GCCTGGGTGG CCGGTGAATA TGGCATGGAT
ATGTTGATGC CGCTGATCAA GGTGATTCTG GCGGTTTATA TAGGCTGCGC CCTGCATATC
ATAGGTTTCT ACAGCCTGGT GCTGACCTTC GTGGCCAAGC TCAACCCCAT GCAGTTCTTC
AAGGGGATCA GCAATGCACT GGCGGTGGCC TATACCACCT CAAGCAGCGC CGGCACCTTG
CCTGCCAGCA TGAAGTGCGC CAGCGAATCC TTAGGGATCA ACAAGAAGAT CTCCAGCTTC
GTGCTGCCCC TGGGTACCAC CATCAACATG GATGGCACCG CCCTGTATCA GGGAGTCACG
GCGCTGTTTG TTGCCCAAGC CTTCGGGATC GACCTCACCT GGGTCGACTA TATCACCATC
ATTCTCACCG CGACCCTGGC TTCAATTGGT ACCGCTGGGG TGCCGGGTGC GGGTCTGGTG
ATGCTTACCC TAGTGCTGAC CACGGTTGGC CTGCCGCTGG AAGGGGTGGC GATCATCGCG
GGTATCGATC GTATCTTGGA TATGGCGCGT ACCGTAGTGA ACGTGTCCGG GGATCTGGTG
GCGACCACAG TGATCGCCAA GTCTGAAGAT GAGCTGGATC TCGAGCACTA CAACGCCGAC
GCCGAGCAGA GCCAGATACT GGCAGAGCGC CTGGATAGCT AG
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| Protein sequence | MMRQQTSSWL GRAWSGWMSV PLWLQILIGM LLGICAGLGL GEQAVLLKPI GTLFVNTIKM
LIVPLVFCSL IVGVTSMQDT AKMGRIGFKS FAFYLGTTSI AITLGLAVGH IMQPGAGLAM
TSAESHNAVK EVPSIMETLI NIVPTNPIAA LASGQILQVI VFAVALGIAL VLIGDHGKPA
IKVFESLAEA MYKLTDMVMK LAPYGVFGLM AWVAGEYGMD MLMPLIKVIL AVYIGCALHI
IGFYSLVLTF VAKLNPMQFF KGISNALAVA YTTSSSAGTL PASMKCASES LGINKKISSF
VLPLGTTINM DGTALYQGVT ALFVAQAFGI DLTWVDYITI ILTATLASIG TAGVPGAGLV
MLTLVLTTVG LPLEGVAIIA GIDRILDMAR TVVNVSGDLV ATTVIAKSED ELDLEHYNAD
AEQSQILAER LDS
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