Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0739 |
Symbol | |
ID | 4924066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 840729 |
End bp | 842000 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640162272 |
Product | aromatic amino acid permease |
Protein accession | YP_001092870 |
Protein GI | 127511673 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACG AAGCGACAAT CTCTGATGTA AACCTCGCGC AGCGCCAAGG TTGGACTCGC AGCGACACGA CCTGGATGTT GAGCCTGTTC GGCACCGCCG TCGGCGCCGG TATCCTGTTT CTACCCATCA ATGCCGGCAT GGGCGGTTTC TGGCCCCTGG TGCTGATGGC CGTGATTATC GGTCCCATGA CCTACCTGGC CCACAGAGGC CTGTCTCGTT TCGTCTGCTC CTCTCAGCGT CAGGGTAGCG ACATCACCCA TGTGGTCGAA GAGTATTTTG GCGTCGGCGC CGGTAAGGCG ATCACCTTGC TCTACTTCTT CGCCATCTAC CCCATAGTGC TCATCTATGG TGTGGGTATC ACCAACACGG TCGACAGTTT CATCGTCAAC CAGCTGGGCA TGGCCTCGCC ACCACGCTTC CTGCTGTCCG GTATCTTAGT GCTGGGCATG ATGTCTGTGA TGGTGTCTGG CGAGAAGTTT ATGCTCAAGG TGACTCAGCT GCTGGTGTAT CCACTGGTGG GGATCCTGGC CTTTATGTCG CTGTACCTGA TCCCAAGCTG GAAGATGGAC GCCCTGATGG AAGTGCCTGC CGCCGGTGAG TTTCTCGGTA CCGTCTGGCT GACTATTCCA GTGCTGGTAT TTGCCTTCAA CCATTCGCCA GCCATCTCAC AGTTCTCGGT ATCGCTGAAG AAGCAGTACG GTAGTAACGC GGCCAAGAAG GCCGATGTGA TCCTGCGTAA CACCAGCATG ATGTTGGTGG GCTTCGTGAT GCTGTTTGTC TTCTCCTGCG TACTGTCGCT GAGTCCAGCC CAGCTGGCCG AAGCCAAGGC GCAGAACCTG CCGATCCTCT CATACCTGGC CAACGTACAC GCCAGCGGTT TCGTCAGCTA TTTCGGCCCC ATCATCGCGG TGATCGCCAT CGTCTCCTCA TTCTTCGGTC ACTACCTGGG CGCCACCGAA GGCCTCAAGG GGATCATCAC CAAGCAGCTG CGTAGCAGCA ACAAGGAAGT GTCGGACGCC AAGATCGACA AGTTTATTCT CGGCTTCATG TTCCTGACCA TCTGGGGTGT TGCCGTGATC AACCCGAGCA TCCTGGGGAT GATCGAGGCC CTGGGCGGCC CTATCATCGC CGCGATCCTC TACCTCATGC CTATGTATGC CGTCTACAAG GTGCCTGCGC TCAAGGCTTA CCGTGGTCGC ATCAGCAACA TCTTGGTGAT CCTGGCAGGC TTGCTGGCGA TGACGGCCAT ACTGTTTGGC ATGCTCTCTT AA
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Protein sequence | MQNEATISDV NLAQRQGWTR SDTTWMLSLF GTAVGAGILF LPINAGMGGF WPLVLMAVII GPMTYLAHRG LSRFVCSSQR QGSDITHVVE EYFGVGAGKA ITLLYFFAIY PIVLIYGVGI TNTVDSFIVN QLGMASPPRF LLSGILVLGM MSVMVSGEKF MLKVTQLLVY PLVGILAFMS LYLIPSWKMD ALMEVPAAGE FLGTVWLTIP VLVFAFNHSP AISQFSVSLK KQYGSNAAKK ADVILRNTSM MLVGFVMLFV FSCVLSLSPA QLAEAKAQNL PILSYLANVH ASGFVSYFGP IIAVIAIVSS FFGHYLGATE GLKGIITKQL RSSNKEVSDA KIDKFILGFM FLTIWGVAVI NPSILGMIEA LGGPIIAAIL YLMPMYAVYK VPALKAYRGR ISNILVILAG LLAMTAILFG MLS
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