| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0706 |
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| Symbol | |
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| ID | 4923441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 800542 |
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| End bp | 801219 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640162239 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001092837 |
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| Protein GI | 127511640 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTAA TTACCGGTGC CAGCAGCGGC CTGGGGGCAG CCCTGGCCAA GCGATACGCC
GATCAGGGCG AGCAGGTGAT GATCTCGGGT CGCAACCAGG CCAGACTGGC CGGCGTCGCA
CAAGCGTCAA CGAATCTGCA CCCGCTAGCG GCCGATCTTT GTGATGAGCA GGGCGTCGCG
ACATTACTCG ACACCCTGGC GACCATGAGC GGCGGCGCCG CACTCGACAC TGTTATCCAC
TGCGCCGGCA GCGGCTACTT CGGCCCCATC GCCGAGCAGC AGGCCGATGA GATCCACAAG
CTGATGCAGA ACAACGTCAC CTCCAGCATC TTGCTGGTAC GCGAACTGGT GAAACGCTAT
CAGGACACGC CGCTGCATCT GGTGGTGGTG ATGTCGACGG CGGCCCAGCA GCCCAAGGCG
GGGGAGTCGA CCTACTGCGC GGCGAAATGG GCGGTACGCG GCTTTATCGA GTCGGTACGT
CTGGAACTCA AGGGCAAGCC GATGAAGATC ATCGCCGTCT ATCCCGGCGG CATGGACACA
GGCTTCTGGC CAAGCAGCGG TAAGTCTCTC GATACCTCCA GCTTCATGAG CGCAGACGAA
GCCGCCGAGA TGTTACAGGG CGCCTTGAAG GCCACCGCCC ATGGCCATAT TGCCGATATC
ACCATCGCCA GGGGTTAG
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| Protein sequence | MILITGASSG LGAALAKRYA DQGEQVMISG RNQARLAGVA QASTNLHPLA ADLCDEQGVA
TLLDTLATMS GGAALDTVIH CAGSGYFGPI AEQQADEIHK LMQNNVTSSI LLVRELVKRY
QDTPLHLVVV MSTAAQQPKA GESTYCAAKW AVRGFIESVR LELKGKPMKI IAVYPGGMDT
GFWPSSGKSL DTSSFMSADE AAEMLQGALK ATAHGHIADI TIARG
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