| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0697 |
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| Symbol | rihA |
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| ID | 4923542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 790034 |
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| End bp | 791041 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162230 |
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| Product | ribonucleoside hydrolase 1 |
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| Protein accession | YP_001092828 |
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| Protein GI | 127511631 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAT CAAACGCTGC CCCACATTCT CACGCAGCAA ACGCTTCTCC AAAAGCCATC
CGCCCGCTCG CCTCGGCGAC CCCGATTATT CTCGACTGCG ACCCAGGCCA TGACGATGCG
ATCTCCCTGA TCCTGGCGCT GAGCAGCGAG CGCCTCAATC CGTTGGCGGT CACCACCAGC
GCGGGTAACC AGACGCCGGA CAAGACCCTC AACAACGCCC TGCGCATCCT GACCTTGCTC
AACCGCGCCG ACATGCCGGT GGCCGGCGGC GCGGTGAAGC CCCTGGCCAG GGAGCTGATT
ATCGCCGACA ACGTCCACGG CGAAAGCGGT CTCGACGGCC CTAAGCTGCC AGATCCCAGC
TTTGATCCCC TAACGCAAAA CGCCATCGAG CTGATGGCCG AAAAGGTGCG TCAGAGCGCA
GTACCCGTAA CCTTAGTGCC CTCCGGGCCA CTGACCAATA TCGCCCTGTT TATCGCTAAC
TATCCCGAGC TACACAGCAA GGTGGAGCGA ATCGTGCTGA TGGGCGGCGC CGCGGGGGTT
GGCAACTGGA CCCCAGCCGC CGAGTTCAAC ATCTTCGTCG ACCCAGAGGC GGCCGATATG
GTGTTCAAAT CGGGCATTCC TATCACCATG TGCGGCCTGG ACGTGACCCA CGAGGCGCAG
ATCATGGATG AGGATATCGA GCGGATCCGC GCCATCCCCA ACCCTGTGGC CCAGTGTGTC
GCCGAGCTGC TGGACTTCTT CATGATCTAC CACAGAGATC CTAAGTGGGG CTTCACCGGC
GCACCGCTGC ACGATCCCTG CACCATCGCC TGGCTGCTAA AACCTGAGCT GTTCACCGCC
CAGGAGTGCT GGGTCGGCGT CGAGACCAAG GGTGAATATA CCCAAGGGAT GACGGTGGTG
GATCGCTATC AGCTAACCGG CAAGACGGCT AACGCCACTG TGCTGTTTGA CTTAGATCGC
CAAGGCTTCG TCGACCTGAT TGTCGACTGT CTCAGCGCCT ATAATTAA
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| Protein sequence | MTQSNAAPHS HAANASPKAI RPLASATPII LDCDPGHDDA ISLILALSSE RLNPLAVTTS
AGNQTPDKTL NNALRILTLL NRADMPVAGG AVKPLARELI IADNVHGESG LDGPKLPDPS
FDPLTQNAIE LMAEKVRQSA VPVTLVPSGP LTNIALFIAN YPELHSKVER IVLMGGAAGV
GNWTPAAEFN IFVDPEAADM VFKSGIPITM CGLDVTHEAQ IMDEDIERIR AIPNPVAQCV
AELLDFFMIY HRDPKWGFTG APLHDPCTIA WLLKPELFTA QECWVGVETK GEYTQGMTVV
DRYQLTGKTA NATVLFDLDR QGFVDLIVDC LSAYN
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