| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0665 |
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| Symbol | |
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| ID | 4923005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 755369 |
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| End bp | 757153 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162198 |
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| Product | sulfite reductase (NADPH) flavoprotein, alpha chain |
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| Protein accession | YP_001092796 |
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| Protein GI | 127511599 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
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| TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000314937 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGTTAA AAGAGCTTTC ATCACTGGCT TCTCCCCTGT CTGCGACGCA GGTGGATAAG
CTTAAGCAAC TCACCTCTGA ACTCAACGCC GTGCAACTCG CCTGGGTAGG CGGTTACCTG
TCGGCCACGG CCGAACTGAG CGGCGTGGCC GGCGAGGTGC AGCAAGCGCC CCAGCAGACT
ATCACCATTC TCTACGGCAG CCAGACAGGT AATGGCCGCG GTATCGCCAC CGAGCTGGCC
GAGAAGGCGC AGGCCCAGGG CTATAGCGTC AACCTAGTCT CCATGGCCGA TTACAAGACG
CGCCAGCTCA AGCAGGAGAC ACTGCTGCTT GCCGTGGTGA GCACCCATGG TGAAGGCGAG
GCGCCGGACG ACGCCATCGA GCTGCACAAG TTCCTGGCCT CTAAGCGCGC CCCTCAGCTA
GACACCCTCA ACTACGCCGT ATTGGCGCTG GGAGACTCCA GCTATGAGTT CTTCTGCCAG
ACGGGTAAAG ATTTTGATGC GCGCCTGAGC GCACTGGGCG CCAAGGCGAT CGTGCCGCTC
ACCGAGTGTG ACGTGGACTA CGAGAGCGCG GCCAGTCAGT GGCAAGAAGC CGTGCTGTGC
GCGGTCAAGC CACTGGTGGG CACCGGCGCC AGCGTGGTCT CCATCGGCAG CGCAAGCAGC
AAAGTCAGCA GCTCGGCCTT CAGCAAGCAG AAGCCCTACA GCGCCGAGCT ACTGGTGAGT
CAGAAGCTCA CCGGCCGTGA TTCGGACCGC GACGTACGCC ATGTGGAGAT AGACCTTGGC
GAGTCTGGCC TGAGCTATCA GGTGGGTGAT GCCTTGGGCG TCTGGTTCAG TAACAGCGAC
GCCCTGGTTG AAGAGATCAT CAATGGCCTG TCTCTAGATG GCGAGGCCGA GGTGACTCTG
GGGGGCGCCA CCCTAACGTT AGCCCAGGCG CTCAAAGAGA AGCGCGAGCT GACCCAGCTC
TATCCCGGCC TGGTGCAAAA CTGGGCGCAG CTGAGCGGCA ACGAAGCGCT ACAGGCGATC
AGCGAAGACA GAGAGCAGAC CCGCCAGTTT ATCCTTAAGC ATCAGCTTGC CGACCTGGTG
GCCAAGTATC CTGTGGATAT CGGTGCCTTC CAGCTGGTGG AGCTGCTGCG TCCAATTACC
CCAAGACTCT ACTCTATCGC CTCGAGCCAG TCTGAGGTGG AGAGCGAGGT ACATTTGACC
GTGGCCTTGG TGGCTGATGA GCGCGACTCG GGCACCCGCT TTGGCGGCGC GTCTCACTTC
CTGGCAAGCG CCGAGGAAGG CGCCGAGGTG AAGGTCTATG TGGAGCCGAA CAACCACTTC
CGTCTGCCGG AAAACCCAGA CACGCCTGTG GTCATGATTG GCCCTGGTAC GGGGGTAGCA
CCGTTTCGTG CCTTCATGCA GGAGCGCGCG GCCCAAGGTG CCCAAGGCGA TAGCTGGCTC
TTCTTCGGTA ATCCGCACTT CGAGCAGGAT TTCCTCTACC AGACAGAGTG GCAGCAGTAT
CTCAAAGATG GCGTGCTGAC CCGCTTAGAT TCCGCCTTCT CGCGGGATCA AGCCCATAAG
ATCTATGTGC AGCACCGCAT CCTGGAGCAG GGCGAGACAT TGTGGCAGTG GATCGAGCGC
GGCGCGCATC TCTATATCTG CGGCGACGCC GATCGCATGG CCAAAGATGT GCATCAGGCC
CTGATCGAGG TGATCAAGCA ACATGGCGGC AAGAGCGAAG AGCAGGCCGA GGCCCTGCTT
GAGAGCCTGC GCAGCGACAA GCGTTACCAG AAAGACGTTT ATTAA
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| Protein sequence | MLLKELSSLA SPLSATQVDK LKQLTSELNA VQLAWVGGYL SATAELSGVA GEVQQAPQQT
ITILYGSQTG NGRGIATELA EKAQAQGYSV NLVSMADYKT RQLKQETLLL AVVSTHGEGE
APDDAIELHK FLASKRAPQL DTLNYAVLAL GDSSYEFFCQ TGKDFDARLS ALGAKAIVPL
TECDVDYESA ASQWQEAVLC AVKPLVGTGA SVVSIGSASS KVSSSAFSKQ KPYSAELLVS
QKLTGRDSDR DVRHVEIDLG ESGLSYQVGD ALGVWFSNSD ALVEEIINGL SLDGEAEVTL
GGATLTLAQA LKEKRELTQL YPGLVQNWAQ LSGNEALQAI SEDREQTRQF ILKHQLADLV
AKYPVDIGAF QLVELLRPIT PRLYSIASSQ SEVESEVHLT VALVADERDS GTRFGGASHF
LASAEEGAEV KVYVEPNNHF RLPENPDTPV VMIGPGTGVA PFRAFMQERA AQGAQGDSWL
FFGNPHFEQD FLYQTEWQQY LKDGVLTRLD SAFSRDQAHK IYVQHRILEQ GETLWQWIER
GAHLYICGDA DRMAKDVHQA LIEVIKQHGG KSEEQAEALL ESLRSDKRYQ KDVY
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